RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
CD9-202ENST00000382515 UQCC3Q6UW78 93 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 NUDT10Q8NFP7 164 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 OR2D3Q8NGH3 330 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 NUDT11Q96G61 164 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 MRPL16Q9NX20 251 aaKnown RBP12.47□□□□□ -0.41
CD9-202ENST00000382515 PHLDA3Q9Y5J5 127 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 A0A1W2PPQ1 181 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 GRIFINA4D1Z8 144 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 A8MWV9 139 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 C9JQL5 133 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 OR5AL1P0C617 328 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 HTN3P15516 51 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 LINC01551Q86U37 167 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 NAT8Q9UHE5 227 aa12.46□□□□□ -0.41
CD9-202ENST00000382515 TMSB15BA0A087X1C1 80 aa12.45□□□□□ -0.42
CD9-202ENST00000382515 F2Z2F3 143 aa12.45□□□□□ -0.42
CD9-202ENST00000382515 K7EN84 100 aa12.45□□□□□ -0.42
CD9-202ENST00000382515 ZFP82Q8N141 532 aa12.45□□□□□ -0.42
CD9-202ENST00000382515 CSMD3Q7Z407 3707 aa12.45□□□□□ -0.42
CD9-202ENST00000382515 IGHV4-4A0A075B6R2 117 aa12.44□□□□□ -0.42
CD9-202ENST00000382515 H3BVH4 76 aa12.44□□□□□ -0.42
CD9-202ENST00000382515 SNAI2O43623 268 aa12.44□□□□□ -0.42
CD9-202ENST00000382515 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
CD9-202ENST00000382515 CT83Q5H943 113 aa12.44□□□□□ -0.42
CD9-202ENST00000382515 DYNC2H1Q8NCM8 4307 aaKnown RBP12.43□□□□□ -0.42
CD9-202ENST00000382515 A8MWL6 223 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 RS1O15537 224 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 WDR73Q6P4I2 378 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 ZFP2Q6ZN57 461 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 RPP21Q9H633 154 aaKnown RBP12.43□□□□□ -0.42
CD9-202ENST00000382515 OSTCQ9NRP0 149 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 PRO0255Q9UI72 69 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 APLNQ9ULZ1 77 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 HHLA3Q9XRX5 114 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 STARD9Q9P2P6 4700 aa12.43□□□□□ -0.42
CD9-202ENST00000382515 FAM231BA6NCW3 169 aa12.42□□□□□ -0.42
CD9-202ENST00000382515 GATCO43716 136 aaKnown RBP12.42□□□□□ -0.42
CD9-202ENST00000382515 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
CD9-202ENST00000382515 C15orf54Q8N8G6 183 aa12.42□□□□□ -0.42
CD9-202ENST00000382515 RNASE7Q9H1E1 156 aaKnown RBP12.42□□□□□ -0.42
CD9-202ENST00000382515 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 CACNG7P62955 275 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 FHL2Q14192 279 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 TMEM88Q6PEY1 159 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 POM121L12Q8N7R1 296 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 FER1L6-AS1Q8NA97 138 aa12.41□□□□□ -0.42
CD9-202ENST00000382515 LINC00862A6NCI5 91 aa12.4□□□□□ -0.42
CD9-202ENST00000382515 RHODO00212 210 aa12.4□□□□□ -0.42
CD9-202ENST00000382515 SFTA3P0C7M3 94 aa12.4□□□□□ -0.42
CD9-202ENST00000382515 HOXA5P20719 270 aa12.4□□□□□ -0.42
CD9-202ENST00000382515 FOXA3P55318 350 aaPredicted RBP12.4□□□□□ -0.42
CD9-202ENST00000382515 RPL23P62829 140 aaKnown RBP12.4□□□□□ -0.42
CD9-202ENST00000382515 PNRC1Q12796 327 aaPredicted RBP12.4□□□□□ -0.42
CD9-202ENST00000382515 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
CD9-202ENST00000382515 SFRP2Q96HF1 295 aa12.4□□□□□ -0.42
CD9-202ENST00000382515 ZNF479Q96JC4 524 aa12.4□□□□□ -0.42
CD9-202ENST00000382515 PLECQ15149 4684 aaKnown RBP12.39□□□□□ -0.43
CD9-202ENST00000382515 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
CD9-202ENST00000382515 NXPH4O95158 308 aa12.39□□□□□ -0.43
CD9-202ENST00000382515 ISOC2Q96AB3 205 aa12.39□□□□□ -0.43
CD9-202ENST00000382515 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
CD9-202ENST00000382515 M0R381 172 aa12.38□□□□□ -0.43
CD9-202ENST00000382515 PAX4O43316 350 aa12.38□□□□□ -0.43
CD9-202ENST00000382515 IGHV3-53P01767 116 aa12.38□□□□□ -0.43
CD9-202ENST00000382515 CRYBA4P53673 196 aa12.38□□□□□ -0.43
CD9-202ENST00000382515 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
CD9-202ENST00000382515 TRBV6-4A0A1B0GX49 114 aa12.37□□□□□ -0.43
CD9-202ENST00000382515 P0DMU3 169 aa12.37□□□□□ -0.43
CD9-202ENST00000382515 FAM231AP0DMU4 169 aa12.37□□□□□ -0.43
CD9-202ENST00000382515 FAM231CP0DMU5 169 aa12.37□□□□□ -0.43
CD9-202ENST00000382515 ADIRFQ15847 76 aa12.37□□□□□ -0.43
CD9-202ENST00000382515 TSKUQ8WUA8 353 aa12.37□□□□□ -0.43
CD9-202ENST00000382515 CNFNQ9BYD5 112 aa12.37□□□□□ -0.43
CD9-202ENST00000382515 TMEM218A2RU14 115 aa12.36□□□□□ -0.43
CD9-202ENST00000382515 GATA1P15976 413 aaPredicted RBP12.36□□□□□ -0.43
CD9-202ENST00000382515 SH2D6Q7Z4S9 175 aa12.36□□□□□ -0.43
CD9-202ENST00000382515 OR10G8Q8NGN5 311 aa12.36□□□□□ -0.43
CD9-202ENST00000382515 OR10AG1Q8NH19 301 aa12.36□□□□□ -0.43
CD9-202ENST00000382515 TENM2Q9NT68 2774 aa12.36□□□□□ -0.43
CD9-202ENST00000382515 MUC4Q99102 2169 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 GZMBP10144 247 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 CTRLP40313 264 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 MRPL23Q16540 153 aaKnown RBP12.35□□□□□ -0.43
CD9-202ENST00000382515 RNF212Q495C1 297 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 LYZL1Q6UWQ5 148 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 COMMD7Q86VX2 200 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 VSIG2Q96IQ7 327 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 PRADC1Q9BSG0 188 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
CD9-202ENST00000382515 CRYGDP07320 174 aa12.34□□□□□ -0.43
CD9-202ENST00000382515 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
CD9-202ENST00000382515 UFSP1Q6NVU6 142 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms