RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 FAM90A1Q86YD7 464 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 CTSZQ9UBR2 303 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 IGHV1-45A0A0A0MS14 117 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 DKK1O94907 266 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 B3GALT5-AS1P59052 145 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 C16orf92Q96LL3 132 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 C20orf173Q96LM9 149 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 RETNQ9HD89 108 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 GATA1P15976 413 aaPredicted RBP7.22□□□□□ -1.25
PTPRA-204ENST00000380393 Q6ZS46 218 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 PRIMA1Q86XR5 153 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 CXCL5P42830 114 aa7.21□□□□□ -1.25
PTPRA-204ENST00000380393 CCL8P80075 99 aa7.21□□□□□ -1.25
PTPRA-204ENST00000380393 SERP2Q8N6R1 65 aa7.21□□□□□ -1.25
PTPRA-204ENST00000380393 PEMTQ9UBM1 199 aa7.21□□□□□ -1.25
PTPRA-204ENST00000380393 NACAE9PAV3 2078 aa7.21□□□□□ -1.25
PTPRA-204ENST00000380393 PINLYPA6NC86 204 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 SPRY2O43597 315 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 DEFB121Q5J5C9 76 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 TLN1Q9Y490 2541 aaKnown RBP7.21□□□□□ -1.26
PTPRA-204ENST00000380393 LINC01546A6NGU7 62 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 LOXL3P58215 753 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 Q8IYB0 196 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 KLK15Q9H2R5 256 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 TMEM14BQ9NUH8 114 aa7.21□□□□□ -1.26
PTPRA-204ENST00000380393 KALRNO60229 2985 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 PROP1O75360 226 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 IGLV2-11P01706 119 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 SYNJ2BPP57105 145 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 LAGE3Q14657 143 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 RHOHQ15669 191 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 IMMP1LQ96LU5 166 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 HES7Q9BYE0 225 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 C17orf100A8MU93 164 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 AVPP01185 164 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 COX6B1P14854 86 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 RPL18AQ02543 176 aaKnown RBP7.2□□□□□ -1.26
PTPRA-204ENST00000380393 CD177Q8N6Q3 437 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 ROS1P08922 2347 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 PTPRQQ9UMZ3 2332 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 FSTL3O95633 263 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 CRIP1P50238 77 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 PRR25Q96S07 402 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
PTPRA-204ENST00000380393 TRAV12-1A0A0B4J245 112 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 C2orf83Q53S99 150 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 TMEM263Q8WUH6 116 aaKnown RBP7.19□□□□□ -1.26
PTPRA-204ENST00000380393 C17orf77Q96MU5 243 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 TP53TG1Q9Y2A0 90 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 CADP27708 2225 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 TRIAP1O43715 76 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 TRBV7-1A0A0A6YYK4 115 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 LINC00482Q8N8I6 264 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 MSRB1Q9NZV6 116 aa7.19□□□□□ -1.26
PTPRA-204ENST00000380393 ADGRG4Q8IZF6 3080 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 TRAV12-2A0A075B6T6 113 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 HIST1H4AP62805 103 aaKnown RBP7.18□□□□□ -1.26
PTPRA-204ENST00000380393 SLC25A29Q8N8R3 303 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 IGHV3-21A0A0B4J1V1 117 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
PTPRA-204ENST00000380393 RNASE2P10153 161 aaKnown RBP7.18□□□□□ -1.26
PTPRA-204ENST00000380393 NAV3Q8IVL0 2385 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 LYZL6O75951 148 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 APELAP0DMC3 54 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 MAGEA5P43359 124 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 PRCDQ00LT1 54 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 VMA21Q3ZAQ7 101 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 SCGB3A1Q96QR1 104 aa7.18□□□□□ -1.26
PTPRA-204ENST00000380393 ACACBO00763 2458 aa7.17□□□□□ -1.26
PTPRA-204ENST00000380393 A0A0B4J2C4 111 aa7.17□□□□□ -1.26
PTPRA-204ENST00000380393 ZNRF1Q8ND25 227 aa7.17□□□□□ -1.26
PTPRA-204ENST00000380393 CIRBPQ14011 172 aaKnown RBP7.17□□□□□ -1.26
PTPRA-204ENST00000380393 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
PTPRA-204ENST00000380393 TRBV30A0A0K0K1B3 111 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 IQCF6A8MYZ5 107 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 M0R3E3 92 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 COX6CP09669 75 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 GP9P14770 177 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 CCL11P51671 97 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 C14orf178Q8N769 122 aaPredicted RBP7.16□□□□□ -1.26
PTPRA-204ENST00000380393 TRAV8-3A0A0A6YYJ7 113 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 TIRAPP58753 221 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 DEFB108BQ8NET1 73 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 CLEC2BQ92478 149 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 ZNRD1Q9P1U0 126 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 POLEQ07864 2286 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 IGLV2-18A0A075B6J9 118 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 TMEM89A2RUT3 159 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 NDUFC2O95298 119 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 FHL2Q14192 279 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 ZCCHC24Q8N2G6 241 aaKnown RBP7.16□□□□□ -1.26
PTPRA-204ENST00000380393 TMEM243Q9BU79 118 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 ITPR1Q14643 2758 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 ZFYVE26Q68DK2 2539 aa7.16□□□□□ -1.26
PTPRA-204ENST00000380393 SH2D1AO60880 128 aa7.15□□□□□ -1.26
PTPRA-204ENST00000380393 PSMB8P28062 276 aa7.15□□□□□ -1.26
PTPRA-204ENST00000380393 DEFB109BQ30KR1 87 aa7.15□□□□□ -1.26
PTPRA-204ENST00000380393 C1orf229Q6ZS94 237 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms