RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ZNRD1Q9P1U0 126 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 E9PLD3 99 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 DUX4L9Q6RFH8 374 aaPredicted RBP7.53□□□□□ -1.2
SNX1-202ENST00000380285 SH2D6Q7Z4S9 175 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 FOXI1Q12951 378 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 XCL2Q9UBD3 114 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 DEFB104AQ8WTQ1 72 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 AGPAT4-IT1Q9H0P7 198 aa7.52□□□□□ -1.2
SNX1-202ENST00000380285 TAX1BP3O14907 124 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 FUSP35637 526 aaKnown RBP eCLIP7.52□□□□□ -1.21
SNX1-202ENST00000380285 TOMM6Q96B49 74 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 ARHGAP32A7KAX9 2087 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 Q9H8V8 135 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 TPSG1Q9NRR2 321 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 PDE6GP18545 87 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 C2orf16Q68DN1 1984 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 G3V318 75 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
SNX1-202ENST00000380285 PCDH15Q96QU1 1955 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 C11orf86A6NJI1 115 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 LINC01620Q4KN68 170 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 TRBV10-2A0A0K0K1G8 114 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 IGHG2P01859 326 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 NBL1P41271 181 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 DSCAML1Q8TD84 2053 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 TRAV25A0A0B4J276 109 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 I3L2K1 104 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
SNX1-202ENST00000380285 FAM167A-AS1Q96KT0 104 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 ZNF503-AS2A6NEH8 195 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 F5H768 121 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 C11orf53Q8IXP5 236 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 hADV29S1A0JD25 119 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 VPREB1P12018 145 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 A4D1N5 150 aa7.5□□□□□ -1.21
SNX1-202ENST00000380285 MRPL23Q16540 153 aaKnown RBP7.5□□□□□ -1.21
SNX1-202ENST00000380285 RNASE8Q8TDE3 154 aaKnown RBP7.49□□□□□ -1.21
SNX1-202ENST00000380285 RIF1Q5UIP0 2472 aaKnown RBP7.49□□□□□ -1.21
SNX1-202ENST00000380285 IGLV11-55A0A075B6I3 123 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 CXCL5P42830 114 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 C16orf54Q6UWD8 224 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 ZNF524Q96C55 264 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 TRAV12-2A0A075B6T6 113 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 LY6G6EA0A0G2JKS1 128 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 K7ENP7 123 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 NDUFS5O43920 106 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 OPRPNQ99935 248 aaPredicted RBP7.49□□□□□ -1.21
SNX1-202ENST00000380285 U3KQA8 63 aa7.49□□□□□ -1.21
SNX1-202ENST00000380285 NUPR1O60356 82 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 FAM236AA0A1B0GUQ0 79 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 FAM236BA0A1B0GV22 79 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 HOXB4P17483 251 aaPredicted RBP7.48□□□□□ -1.21
SNX1-202ENST00000380285 FXYD2P54710 66 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 TDRG1Q3Y452 100 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 SPATA25Q9BR10 227 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 PLA2G2EQ9NZK7 142 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 MUSTN1Q8IVN3 82 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 A0A1B0GX51 115 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 WI2-2373I1.2A0A1W2PRP0 233 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 K7EIM0 57 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 ODF1Q14990 250 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 C11orf1Q9H5F2 150 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 TNRC6BQ9UPQ9 1833 aaKnown RBP7.48□□□□□ -1.21
SNX1-202ENST00000380285 GTSF1Q8WW33 167 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 BAALCQ8WXS3 180 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 SND1-IT1Q9HBX3 110 aa7.48□□□□□ -1.21
SNX1-202ENST00000380285 ANGP03950 147 aaKnown RBP7.47□□□□□ -1.21
SNX1-202ENST00000380285 PSMB8P28062 276 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 C17orf77Q96MU5 243 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 IGHV3-38A0A0C4DH36 116 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 NXPH4O95158 308 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 C16orf74Q96GX8 76 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 IGKV1-17P01599 117 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 MP68P56378 58 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 LY6DQ14210 128 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 CRYGCP07315 174 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 WFDC2Q14508 124 aa7.47□□□□□ -1.21
SNX1-202ENST00000380285 GNRH2O43555 120 aa7.46□□□□□ -1.21
SNX1-202ENST00000380285 BUB3O43684 328 aa7.46□□□□□ -1.21
SNX1-202ENST00000380285 LINC00643Q86TS7 51 aa7.46□□□□□ -1.21
SNX1-202ENST00000380285 TMEM256-PLSCR3K7ERE1 68 aa7.46□□□□□ -1.21
SNX1-202ENST00000380285 LGALS9O00182 355 aa7.46□□□□□ -1.21
SNX1-202ENST00000380285 WISP1O95388 367 aa7.46□□□□□ -1.21
SNX1-202ENST00000380285 GNLYP22749 145 aa7.46□□□□□ -1.21
SNX1-202ENST00000380285 CLPSL1A2RUU4 121 aa7.46□□□□□ -1.22
SNX1-202ENST00000380285 C19orf71A6NCJ1 209 aa7.46□□□□□ -1.22
SNX1-202ENST00000380285 K7EMT4 169 aa7.46□□□□□ -1.22
SNX1-202ENST00000380285 K7EQD1 137 aa7.46□□□□□ -1.22
SNX1-202ENST00000380285 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
SNX1-202ENST00000380285 TMEM89A2RUT3 159 aa7.46□□□□□ -1.22
SNX1-202ENST00000380285 U3KQE9 123 aa7.46□□□□□ -1.22
SNX1-202ENST00000380285 DEFB121Q5J5C9 76 aa7.45□□□□□ -1.22
SNX1-202ENST00000380285 LY6HO94772 140 aa7.45□□□□□ -1.22
SNX1-202ENST00000380285 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
SNX1-202ENST00000380285 UNQ6494/PRO21346Q6UXR6 183 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms