RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 A0A087X0K7 114 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 H3BUT2 72 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 APCSP02743 223 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 ZNF502Q8TBZ5 544 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 C20orf173Q96LM9 149 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 MYCNOSP40205 109 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 ZNF138P52744 262 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 NDUFV3P56181 108 aaKnown RBP8.32□□□□□ -1.08
NEDD9-201ENST00000379433 TM2D2Q9BX73 214 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 H3BS24 57 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 YPEL3P61236 119 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-201ENST00000379433 WI2-2373I1.2A0A1W2PRP0 233 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 FOXI2Q6ZQN5 318 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 Q6ZUT4 128 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 Q6ZWC4 215 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 SYT8Q8NBV8 401 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 GTSF1Q8WW33 167 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 FMC1Q96HJ9 113 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 RPP21Q9H633 154 aaKnown RBP8.31□□□□□ -1.08
NEDD9-201ENST00000379433 CHEK1O14757 476 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 GDF5OSQ5U4N7 250 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 Q6ZQT7 251 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 METTL26Q96S19 204 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 SMAD5-AS1Q9Y6J3 95 aa8.31□□□□□ -1.08
NEDD9-201ENST00000379433 NPIPB6E9PJ23 425 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 OR10AG1Q8NH19 301 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 IGKV3-20P01619 116 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 CTRLP40313 264 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 KRTAP21-3Q3LHN1 58 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 LINC01356Q8N9X3 169 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 OR4X2Q8NGF9 303 aa8.3□□□□□ -1.08
NEDD9-201ENST00000379433 IZUMO1RA6ND01 250 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 LTAP01374 205 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 BVES-AS1Q5T3Y7 98 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 ATOH7Q8N100 152 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 WFDC11Q8NEX6 87 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 C16orf92Q96LL3 132 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 C20orf78Q9BR46 151 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 NACAE9PAV3 2078 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 A8MWL6 223 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 F6UB75 175 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 IGLV2-11P01706 119 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 LCN12Q6JVE5 192 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 ARMS2P0C7Q2 107 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 IFITM1P13164 125 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 GAGE2EQ4V326 116 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 FAM231DQ6ZW35 169 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 GAGE2DQ9UEU5 116 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 LY96Q9Y6Y9 160 aa8.29□□□□□ -1.08
NEDD9-201ENST00000379433 SMIM27A0A1W2PRY6 76 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 A6NDN8 102 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 FXYD7P58549 80 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 TP53TG3Q9ULZ0 132 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 LOC389332A0A1B0GUA5 103 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 HOXA3O43365 443 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-201ENST00000379433 BUB3O43684 328 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 CRIP1P50238 77 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 DEFB136Q30KP8 78 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 Q6AWC8 147 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 ETDBQ3ZM63 59 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 TMEM14CQ9P0S9 112 aa8.28□□□□□ -1.08
NEDD9-201ENST00000379433 SIGLECL1Q8N7X8 197 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 MLST8Q9BVC4 326 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 TEP1Q99973 2627 aaKnown RBP8.27□□□□□ -1.09
NEDD9-201ENST00000379433 MRPS12O15235 138 aaKnown RBP8.27□□□□□ -1.09
NEDD9-201ENST00000379433 IGF1P05019 195 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 ZNF80P51504 273 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-201ENST00000379433 ZNRF2Q8NHG8 242 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 C2orf48Q96LS8 159 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 ST20Q9HBF5 79 aa8.27□□□□□ -1.09
NEDD9-201ENST00000379433 CLPSL1A2RUU4 121 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 DEFB113Q30KQ7 82 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 GNB1LQ9BYB4 327 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 KLF12Q9Y4X4 402 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 SETXQ7Z333 2677 aaKnown RBP8.26□□□□□ -1.09
NEDD9-201ENST00000379433 TRBV9A0A0B4J1U6 114 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 FAM236AA0A1B0GUQ0 79 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 FAM236BA0A1B0GV22 79 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 FAM181BA6NEQ2 426 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 SH2D1AO60880 128 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 HLA-DQA1P01909 254 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 FABP2P12104 132 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 SLC25A16P16260 332 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 HBBP68871 147 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 SH2D6Q7Z4S9 175 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
NEDD9-201ENST00000379433 TRBV7-1A0A0A6YYK4 115 aa8.25□□□□□ -1.09
NEDD9-201ENST00000379433 A6NDX4 124 aa8.25□□□□□ -1.09
NEDD9-201ENST00000379433 MT-ND6P03923 174 aa8.25□□□□□ -1.09
NEDD9-201ENST00000379433 LINC00310P59036 64 aa8.25□□□□□ -1.09
NEDD9-201ENST00000379433 SMKR1H3BMG3 65 aa8.25□□□□□ -1.09
NEDD9-201ENST00000379433 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms