RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CRYBA4P53673 196 aa8.97□□□□□ -0.97
PTCHD1-201ENST00000379361 C5orf24Q7Z6I8 188 aa8.97□□□□□ -0.97
PTCHD1-201ENST00000379361 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
PTCHD1-201ENST00000379361 TEX36Q5VZQ5 186 aa8.97□□□□□ -0.97
PTCHD1-201ENST00000379361 RNF222A6NCQ9 220 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 GFI1Q99684 422 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 Q9H8V8 135 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 FGF16O43320 207 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 LY6HO94772 140 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 Q6ZS92 163 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 C15orf62A8K5M9 175 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 BAALC-AS2P0C853 105 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 FGFBP3Q8TAT2 258 aa8.96□□□□□ -0.97
PTCHD1-201ENST00000379361 IGKV1D-12P01611 117 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 Q8NFD4 153 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 A8MWP6 167 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 ACYP1P07311 99 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 TMEM14CQ9P0S9 112 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 TRAV4A0A0B4J268 109 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 LINC00473A8K010 186 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 LYPD2Q6UXB3 125 aa8.96□□□□□ -0.98
PTCHD1-201ENST00000379361 MUSTN1Q8IVN3 82 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 PIFOQ8TCI5 191 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 IGKV1D-17A0A075B6S4 117 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 RS1O15537 224 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 RNF126Q9BV68 326 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 DLEU1O43261 78 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 CENPEQ02224 2701 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 ATP6V0E2Q8NHE4 81 aa8.95□□□□□ -0.98
PTCHD1-201ENST00000379361 LOC105371267A0A1B0GV96 52 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 ATP5G1P05496 136 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 H3BRN7 92 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 LTBP1Q14766 1721 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 IGLV2-23P01705 113 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 COX7B2Q8TF08 81 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 G3V318 75 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 FOXE3Q13461 319 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 ZC2HC1AQ96GY0 325 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 SMIM27A0A1W2PRY6 76 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 TRBV19A0A075B6N1 114 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 NTF4P34130 210 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 RNF183Q96D59 192 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 U3KQE9 123 aa8.94□□□□□ -0.98
PTCHD1-201ENST00000379361 ZNF833PQ6ZTB9 187 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 HIST2H2BCQ6DN03 193 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 ATRAIDQ6UW56 229 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 PRSS57Q6UWY2 283 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 USP17L23D6RBM5 183 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 K7EP34 96 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 CXCL5P42830 114 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 IGHV3-30P01768 117 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 IGHV3-33P01772 117 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 IGHV3-30-3P0DP02 117 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 IGHV3-30-5P0DP03 117 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 Q0VG73 95 aa8.93□□□□□ -0.98
PTCHD1-201ENST00000379361 IGKV1D-8A0A087WSZ0 117 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 SRSF3P84103 164 aaKnown RBP8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 ZNF493Q6ZR52 646 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 WIPF2Q8TF74 440 aaPredicted RBP8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 TMEM213A2RRL7 107 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 HHLA3Q9XRX5 114 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 IGKV1-12A0A0C4DH73 117 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 DYNAPQ8N1N2 210 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 H0YIZ8 118 aa8.92□□□□□ -0.98
PTCHD1-201ENST00000379361 TRAV26-2A0A0B4J265 109 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 RNASE13Q5GAN3 156 aaKnown RBP8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 KLHDC3Q9BQ90 382 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 RBAKDNA6NC62 111 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 IGKV1-16P04430 117 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 MRPL51Q4U2R6 128 aaKnown RBP8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 Q6ZVH6 145 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 CXCL1P09341 107 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 ZFP2Q6ZN57 461 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 TGFBR3LH3BV60 316 aa8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 COL5A1P20908 1838 aaPredicted RBP8.91□□□□□ -0.98
PTCHD1-201ENST00000379361 LYPD3O95274 346 aa8.9□□□□□ -0.98
PTCHD1-201ENST00000379361 TRBV7-3A0A075B6L6 115 aa8.9□□□□□ -0.98
PTCHD1-201ENST00000379361 Q6ZS49 121 aa8.9□□□□□ -0.98
PTCHD1-201ENST00000379361 DIRC1Q969H9 104 aa8.9□□□□□ -0.98
PTCHD1-201ENST00000379361 SND1-IT1Q9HBX3 110 aa8.9□□□□□ -0.98
PTCHD1-201ENST00000379361 TAX1BP3O14907 124 aa8.9□□□□□ -0.99
PTCHD1-201ENST00000379361 NCOR1P1Q9H4R4 102 aa8.9□□□□□ -0.99
PTCHD1-201ENST00000379361 IGKV1-27A0A075B6S5 117 aa8.9□□□□□ -0.99
PTCHD1-201ENST00000379361 PDE6GP18545 87 aa8.9□□□□□ -0.99
PTCHD1-201ENST00000379361 UBE2D1P51668 147 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 CEP295Q9C0D2 2601 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 UBE2D4Q9Y2X8 147 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 RNF138Q8WVD3 245 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 SHISA3A0PJX4 238 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 PRB2P02812 416 aaPredicted RBP8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 HOXB4P17483 251 aaPredicted RBP8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 LY6G6FQ5SQ64 297 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 JMJD7-PLA2G4BH0Y9G9 81 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 LENEPQ9Y5L5 61 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 TRBV10-2A0A0K0K1G8 114 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 TRBV12-3P01733 135 aa8.89□□□□□ -0.99
PTCHD1-201ENST00000379361 NDUFA4L2Q9NRX3 87 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms