RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 MOB4Q9Y3A3 225 aa11.69□□□□□ -0.54
RER1-203ENST00000378513 NRACQ8N912 160 aa11.69□□□□□ -0.54
RER1-203ENST00000378513 CNFNQ9BYD5 112 aa11.69□□□□□ -0.54
RER1-203ENST00000378513 GAGE12HA6NDE8 117 aa11.68□□□□□ -0.54
RER1-203ENST00000378513 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
RER1-203ENST00000378513 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
RER1-203ENST00000378513 IGHV1-69P01742 117 aa11.68□□□□□ -0.54
RER1-203ENST00000378513 ANXA2RQ3ZCQ2 193 aa11.68□□□□□ -0.54
RER1-203ENST00000378513 JPT2Q9H910 190 aa11.68□□□□□ -0.54
RER1-203ENST00000378513 NXT2Q9NPJ8 142 aaKnown RBP11.68□□□□□ -0.54
RER1-203ENST00000378513 ZNF462Q96JM2 2506 aa11.68□□□□□ -0.54
RER1-203ENST00000378513 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 IGHV4-30-2A0A087WSY4 118 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 EMP1P54849 157 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 SVIPQ8NHG7 77 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 CYSLTR1Q9Y271 337 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 FBN2P35556 2912 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 A0A1B0GWB2 263 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 DPM2O94777 84 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 Q8N8P6 123 aa11.67□□□□□ -0.54
RER1-203ENST00000378513 AVPP01185 164 aa11.66□□□□□ -0.54
RER1-203ENST00000378513 RAB9AP51151 201 aa11.66□□□□□ -0.54
RER1-203ENST00000378513 CEND1Q8N111 149 aa11.66□□□□□ -0.54
RER1-203ENST00000378513 ZFAND2AQ8N6M9 145 aa11.66□□□□□ -0.54
RER1-203ENST00000378513 WNK1Q9H4A3 2382 aa11.66□□□□□ -0.54
RER1-203ENST00000378513 LAGE3Q14657 143 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 HIST2H2BDQ6DRA6 164 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 C9orf47Q6ZRZ4 202 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 MUC4Q99102 2169 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 RBAKDNA6NC62 111 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 IGLL5B9A064 214 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 ZNF418Q8TF45 676 aaPredicted RBP11.65□□□□□ -0.54
RER1-203ENST00000378513 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 U3KQE9 123 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 CCDC168Q8NDH2 2452 aa11.65□□□□□ -0.54
RER1-203ENST00000378513 TEX15Q9BXT5 2789 aa11.65□□□□□ -0.55
RER1-203ENST00000378513 ATP5J2P56134 94 aa11.65□□□□□ -0.55
RER1-203ENST00000378513 OR10J6PQ8NGY7 276 aa11.65□□□□□ -0.55
RER1-203ENST00000378513 SPAG8Q99932 426 aaPredicted RBP11.65□□□□□ -0.55
RER1-203ENST00000378513 EPG5Q9HCE0 2579 aa11.65□□□□□ -0.55
RER1-203ENST00000378513 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
RER1-203ENST00000378513 SIVA1O15304 175 aa11.64□□□□□ -0.55
RER1-203ENST00000378513 DPF1Q92782 380 aa11.64□□□□□ -0.55
RER1-203ENST00000378513 RHPN1-AS1Q9BWJ2 59 aa11.64□□□□□ -0.55
RER1-203ENST00000378513 DUX5Q96PT3 197 aa11.64□□□□□ -0.55
RER1-203ENST00000378513 C12orf74Q32Q52 190 aa11.63□□□□□ -0.55
RER1-203ENST00000378513 CCL19Q99731 98 aa11.63□□□□□ -0.55
RER1-203ENST00000378513 A0A087WWL8 130 aa11.63□□□□□ -0.55
RER1-203ENST00000378513 J3QR89 54 aa11.63□□□□□ -0.55
RER1-203ENST00000378513 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
RER1-203ENST00000378513 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
RER1-203ENST00000378513 NF1P21359 2839 aa11.63□□□□□ -0.55
RER1-203ENST00000378513 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
RER1-203ENST00000378513 RASL10AQ92737 203 aa11.62□□□□□ -0.55
RER1-203ENST00000378513 C20orf78Q9BR46 151 aa11.62□□□□□ -0.55
RER1-203ENST00000378513 TRAV12-2A0A075B6T6 113 aa11.62□□□□□ -0.55
RER1-203ENST00000378513 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 C9orf139Q6ZV77 190 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 APOMO95445 188 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 CKS1BP61024 79 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
RER1-203ENST00000378513 FOXI2Q6ZQN5 318 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 PTH2Q96A98 100 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 SMIM2Q9BVW6 85 aa11.61□□□□□ -0.55
RER1-203ENST00000378513 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 FAM74A4Q5TZK3 123 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 SCGB1D4Q6XE38 83 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 MRPL16Q9NX20 251 aaKnown RBP11.6□□□□□ -0.55
RER1-203ENST00000378513 ASIPP42127 132 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 SRSF1Q07955 248 aaKnown RBP eCLIP11.6□□□□□ -0.553e-9■■□□□ 14.3
RER1-203ENST00000378513 C19orf54Q5BKX5 351 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 PHLDA1Q8WV24 401 aaPredicted RBP11.6□□□□□ -0.55
RER1-203ENST00000378513 PIMREGQ9BSJ6 248 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 CHTOPQ9Y3Y2 248 aaKnown RBP11.6□□□□□ -0.55
RER1-203ENST00000378513 NIPBLQ6KC79 2804 aaeCLIP11.6□□□□□ -0.55
RER1-203ENST00000378513 A0A1B0GV72 72 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 ZNF688P0C7X2 276 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 PSMB2P49721 201 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 ZMAT4Q9H898 229 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
RER1-203ENST00000378513 SUMO2P61956 95 aaKnown RBP11.59□□□□□ -0.55
RER1-203ENST00000378513 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
RER1-203ENST00000378513 F5H697 171 aa11.59□□□□□ -0.55
RER1-203ENST00000378513 SOCS3O14543 225 aa11.59□□□□□ -0.55
RER1-203ENST00000378513 ATP6V0BQ99437 205 aa11.59□□□□□ -0.55
RER1-203ENST00000378513 RNASE3P12724 160 aaKnown RBP11.58□□□□□ -0.56
RER1-203ENST00000378513 HTN1P15515 57 aa11.58□□□□□ -0.56
RER1-203ENST00000378513 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■□□□□ 8.7
RER1-203ENST00000378513 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
RER1-203ENST00000378513 NDUFS8O00217 210 aa11.58□□□□□ -0.56
RER1-203ENST00000378513 ATP5LO75964 103 aa11.58□□□□□ -0.56
RER1-203ENST00000378513 IGHV4-59P01825 116 aa11.58□□□□□ -0.56
RER1-203ENST00000378513 OR11H1Q8NG94 326 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms