RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
TDP2-202ENST00000378198 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
TDP2-202ENST00000378198 NXPH4O95158 308 aa13.68□□□□□ -0.22
TDP2-202ENST00000378198 LCNL1Q6ZST4 164 aa13.68□□□□□ -0.22
TDP2-202ENST00000378198 VPS25Q9BRG1 176 aa13.68□□□□□ -0.22
TDP2-202ENST00000378198 ZNF580Q9UK33 172 aa13.68□□□□□ -0.22
TDP2-202ENST00000378198 KLLNB2CW77 178 aa13.68□□□□□ -0.22
TDP2-202ENST00000378198 C2orf66Q6UXQ4 117 aa13.68□□□□□ -0.22
TDP2-202ENST00000378198 C21orf62-AS1Q17RA5 79 aa13.67□□□□□ -0.22
TDP2-202ENST00000378198 FAM159AQ6UWV7 190 aa13.66□□□□□ -0.22
TDP2-202ENST00000378198 PHLDA1Q8WV24 401 aaPredicted RBP13.66□□□□□ -0.22
TDP2-202ENST00000378198 KIF25-AS1Q9Y6Z4 181 aa13.66□□□□□ -0.22
TDP2-202ENST00000378198 B4DSR2 109 aa13.65□□□□□ -0.22
TDP2-202ENST00000378198 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
TDP2-202ENST00000378198 NHP2Q9NX24 153 aaKnown RBP13.65□□□□□ -0.22
TDP2-202ENST00000378198 MUC4Q99102 2169 aa13.65□□□□□ -0.22
TDP2-202ENST00000378198 LINC01619G3V211 115 aa13.65□□□□□ -0.22
TDP2-202ENST00000378198 SRD5A1P18405 259 aa13.65□□□□□ -0.22
TDP2-202ENST00000378198 RPL32P62910 135 aaKnown RBP13.65□□□□□ -0.22
TDP2-202ENST00000378198 DCANP1Q8TF63 244 aa13.65□□□□□ -0.22
TDP2-202ENST00000378198 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
TDP2-202ENST00000378198 IGHV4OR15-8A0A075B7B6 117 aa13.64□□□□□ -0.23
TDP2-202ENST00000378198 A0A087WW49 117 aa13.64□□□□□ -0.23
TDP2-202ENST00000378198 LINC01549A6NIU2 74 aa13.64□□□□□ -0.23
TDP2-202ENST00000378198 OR11H12B2RN74 326 aa13.64□□□□□ -0.23
TDP2-202ENST00000378198 OR11H1Q8NG94 326 aa13.64□□□□□ -0.23
TDP2-202ENST00000378198 OR11H2Q8NH07 326 aa13.64□□□□□ -0.23
TDP2-202ENST00000378198 AKAP6Q13023 2319 aa13.64□□□□□ -0.23
TDP2-202ENST00000378198 GATA3P23771 443 aa13.63□□□□□ -0.23
TDP2-202ENST00000378198 LINC00315P59091 139 aa13.63□□□□□ -0.23
TDP2-202ENST00000378198 MYMXA0A1B0GTQ4 84 aa13.63□□□□□ -0.23
TDP2-202ENST00000378198 K7ERJ3 54 aa13.63□□□□□ -0.23
TDP2-202ENST00000378198 AVPP01185 164 aa13.63□□□□□ -0.23
TDP2-202ENST00000378198 SELENOKQ9Y6D0 94 aa13.63□□□□□ -0.23
TDP2-202ENST00000378198 ASH1LQ9NR48 2969 aaKnown RBP13.63□□□□□ -0.23
TDP2-202ENST00000378198 EDN2P20800 178 aa13.62□□□□□ -0.23
TDP2-202ENST00000378198 PSMB8P28062 276 aa13.62□□□□□ -0.23
TDP2-202ENST00000378198 NEGR1Q7Z3B1 354 aa13.62□□□□□ -0.23
TDP2-202ENST00000378198 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
TDP2-202ENST00000378198 PRSS29PA6NIE9 313 aa13.62□□□□□ -0.23
TDP2-202ENST00000378198 SAP30O75446 220 aa13.61□□□□□ -0.23
TDP2-202ENST00000378198 ODF3Q96PU9 254 aa13.61□□□□□ -0.23
TDP2-202ENST00000378198 CYSLTR1Q9Y271 337 aa13.61□□□□□ -0.23
TDP2-202ENST00000378198 TMEM89A2RUT3 159 aa13.6□□□□□ -0.23
TDP2-202ENST00000378198 E9PLD3 99 aa13.6□□□□□ -0.23
TDP2-202ENST00000378198 DSCR9P59020 149 aa13.6□□□□□ -0.23
TDP2-202ENST00000378198 TRBV7-3A0A075B6L6 115 aa13.6□□□□□ -0.23
TDP2-202ENST00000378198 CD7P09564 240 aa13.6□□□□□ -0.23
TDP2-202ENST00000378198 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
TDP2-202ENST00000378198 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
TDP2-202ENST00000378198 TRAV12-3A0A0B4J271 114 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 IGLL5B9A064 214 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 TMEM95Q3KNT9 176 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 SUMO4Q6EEV6 95 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 SVEP1Q4LDE5 3571 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 AGRNO00468 2067 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 G3V4G9 280 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 VCYO14598 125 aa13.59□□□□□ -0.23
TDP2-202ENST00000378198 PAPPA-AS1Q5QFB9 102 aa13.58□□□□□ -0.24
TDP2-202ENST00000378198 DUSP14O95147 198 aaKnown RBP13.57□□□□□ -0.24
TDP2-202ENST00000378198 ZFP2Q6ZN57 461 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 KIR2DL4Q99706 377 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 PRADC1Q9BSG0 188 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 JPT2Q9H910 190 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 IGHV4-59P01825 116 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 LGALS1P09382 135 aaKnown RBP13.57□□□□□ -0.24
TDP2-202ENST00000378198 DEFB112Q30KQ8 113 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 WFDC12Q8WWY7 111 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 ZNF479Q96JC4 524 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 C9orf85Q96MD7 179 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 ZFHX3Q15911 3703 aa13.57□□□□□ -0.24
TDP2-202ENST00000378198 A0A0J9YX75 114 aa13.56□□□□□ -0.24
TDP2-202ENST00000378198 F5H697 171 aa13.56□□□□□ -0.24
TDP2-202ENST00000378198 LGALS9O00182 355 aa13.56□□□□□ -0.24
TDP2-202ENST00000378198 SNRPD3P62318 126 aaKnown RBP13.56□□□□□ -0.24
TDP2-202ENST00000378198 TP53TG1Q9Y2A0 90 aa13.56□□□□□ -0.24
TDP2-202ENST00000378198 A0A1B0GWB2 263 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 IGIPA6NJ69 53 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 CRYGDP07320 174 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 ZNF688P0C7X2 276 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 TMEM141Q96I45 108 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 A0A087WWL8 130 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 IGHV3-16A0A0C4DH30 117 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 TRBV6-5A0A0K0K1A5 114 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 SCGB2A2Q13296 93 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 FOXI2Q6ZQN5 318 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 LINC01356Q8N9X3 169 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 SYT8Q8NBV8 401 aa13.55□□□□□ -0.24
TDP2-202ENST00000378198 K7EQG2 157 aa13.54□□□□□ -0.24
TDP2-202ENST00000378198 TSHBP01222 138 aa13.54□□□□□ -0.24
TDP2-202ENST00000378198 PMVKQ15126 192 aa13.54□□□□□ -0.24
TDP2-202ENST00000378198 TIMM17AQ99595 171 aa13.54□□□□□ -0.24
TDP2-202ENST00000378198 TRBV27A0A0K0K1C4 114 aa13.54□□□□□ -0.24
TDP2-202ENST00000378198 RIPPLY3P57055 190 aa13.54□□□□□ -0.24
TDP2-202ENST00000378198 COTL1Q14019 142 aa13.54□□□□□ -0.24
TDP2-202ENST00000378198 SDHAF1A6NFY7 115 aa13.53□□□□□ -0.24
TDP2-202ENST00000378198 ZNF815PA8K554 130 aa13.53□□□□□ -0.24
TDP2-202ENST00000378198 C10orf99Q6UWK7 81 aa13.53□□□□□ -0.24
TDP2-202ENST00000378198 IGLV4-69A0A075B6H9 119 aa13.52□□□□□ -0.24
TDP2-202ENST00000378198 COX6B1P14854 86 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1172.4 ms