RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 KLK9Q9UKQ9 250 aa11.78□□□□□ -0.52
NPHP4-201ENST00000378156 IGHV1OR15-1A0A075B7D0 117 aa11.78□□□□□ -0.52
NPHP4-201ENST00000378156 I3L3M4 83 aa11.78□□□□□ -0.52
NPHP4-201ENST00000378156 SMIM2Q9BVW6 85 aa11.77□□□□□ -0.52
NPHP4-201ENST00000378156 IGHV7-81A0A0B4J1V7 117 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 FRMD6-AS1P0C7T7 363 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 C10orf105Q8TEF2 133 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 NUP210LQ5VU65 1888 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 KMT2EQ8IZD2 1858 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 INS-IGF2F8WCM5 200 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 FAM167A-AS1Q96KT0 104 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 IGHV4-38-2P0DP08 117 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 C12orf74Q32Q52 190 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 TDRG1Q3Y452 100 aa11.77□□□□□ -0.53
NPHP4-201ENST00000378156 NPBQ8NG41 125 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 SDHAF1A6NFY7 115 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 C20orf78Q9BR46 151 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 TRAV12-2A0A075B6T6 113 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 GAGE5Q13069 117 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 GAGE6Q13070 117 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 MRPL36Q9P0J6 103 aaKnown RBP11.76□□□□□ -0.53
NPHP4-201ENST00000378156 NDUFA12Q9UI09 145 aa11.76□□□□□ -0.53
NPHP4-201ENST00000378156 PTPRSQ13332 1948 aa11.75□□□□□ -0.53
NPHP4-201ENST00000378156 NPYP01303 97 aa11.75□□□□□ -0.53
NPHP4-201ENST00000378156 IGKV1-17P01599 117 aa11.75□□□□□ -0.53
NPHP4-201ENST00000378156 IGLV1-47P01700 117 aa11.75□□□□□ -0.53
NPHP4-201ENST00000378156 GP9P14770 177 aa11.75□□□□□ -0.53
NPHP4-201ENST00000378156 IGHG4P01861 327 aa11.75□□□□□ -0.53
NPHP4-201ENST00000378156 K7EIM0 57 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 K7EMI3 77 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 BLCAPP62952 87 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 TRAV26-2A0A0B4J265 109 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
NPHP4-201ENST00000378156 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 CARD19Q96LW7 228 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 J3QQQ9 107 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 I3L2K1 104 aa11.74□□□□□ -0.53
NPHP4-201ENST00000378156 NRGNQ92686 78 aa11.73□□□□□ -0.53
NPHP4-201ENST00000378156 MYO9AB2RTY4 2548 aa11.73□□□□□ -0.53
NPHP4-201ENST00000378156 IGLV11-55A0A075B6I3 123 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 CCL25O15444 150 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 HIVEP3Q5T1R4 2406 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 AMTNQ6UX39 209 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 HOXD3P31249 432 aaPredicted RBP11.72□□□□□ -0.53
NPHP4-201ENST00000378156 Q8N9W7 124 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 C15orf53Q8NAA6 179 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 NAV3Q8IVL0 2385 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 TRAV13-2A0A0B4J235 113 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 K7ERJ3 54 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 IGLV2-23P01705 113 aa11.72□□□□□ -0.53
NPHP4-201ENST00000378156 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
NPHP4-201ENST00000378156 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
NPHP4-201ENST00000378156 ZFP36P26651 326 aaKnown RBP11.71□□□□□ -0.53
NPHP4-201ENST00000378156 ABCA2Q9BZC7 2435 aa11.71□□□□□ -0.53
NPHP4-201ENST00000378156 NTN5Q8WTR8 489 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-201ENST00000378156 ACYP1P07311 99 aa11.71□□□□□ -0.53
NPHP4-201ENST00000378156 EGR2P11161 476 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-201ENST00000378156 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.53
NPHP4-201ENST00000378156 Q8N7P7 452 aa11.71□□□□□ -0.53
NPHP4-201ENST00000378156 CGB3P0DN86 165 aa11.71□□□□□ -0.54
NPHP4-201ENST00000378156 CGB7P0DN87 165 aa11.71□□□□□ -0.54
NPHP4-201ENST00000378156 DYNAPQ8N1N2 210 aa11.71□□□□□ -0.54
NPHP4-201ENST00000378156 DKK2Q9UBU2 259 aa11.7□□□□□ -0.54
NPHP4-201ENST00000378156 NCKAP5O14513 1909 aa11.7□□□□□ -0.54
NPHP4-201ENST00000378156 F6UB75 175 aa11.7□□□□□ -0.54
NPHP4-201ENST00000378156 CTSGP08311 255 aa11.7□□□□□ -0.54
NPHP4-201ENST00000378156 CFC1BP0CG36 223 aa11.7□□□□□ -0.54
NPHP4-201ENST00000378156 CFC1P0CG37 223 aa11.7□□□□□ -0.54
NPHP4-201ENST00000378156 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
NPHP4-201ENST00000378156 CFHR3Q02985 330 aa11.7□□□□□ -0.54
NPHP4-201ENST00000378156 HAMPP81172 84 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 Q6ZVH6 145 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 LINC00173Q6ZV60 143 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 ZNF503Q96F45 646 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 TMEM126AQ9H061 195 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 ZNF493Q6ZR52 646 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 LENEPQ9Y5L5 61 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 RPL32P62910 135 aaKnown RBP11.69□□□□□ -0.54
NPHP4-201ENST00000378156 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
NPHP4-201ENST00000378156 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 UBE2DNLQ8IWF7 75 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
NPHP4-201ENST00000378156 B5MCH6 92 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 DAD1P61803 113 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 EIF4EBP1Q13541 118 aaPredicted RBP11.68□□□□□ -0.54
NPHP4-201ENST00000378156 DEFB136Q30KP8 78 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 AJUBAQ96IF1 538 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 FOXE3Q13461 319 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 GTSF1Q8WW33 167 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 PLXNB1O43157 2135 aa11.68□□□□□ -0.54
NPHP4-201ENST00000378156 TEX22C9J3V5 150 aa11.67□□□□□ -0.54
NPHP4-201ENST00000378156 FOXI2Q6ZQN5 318 aa11.67□□□□□ -0.54
NPHP4-201ENST00000378156 C5orf56Q8N8D9 126 aa11.67□□□□□ -0.54
NPHP4-201ENST00000378156 TEX48A0A1B0GUV7 120 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms