RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SAPCD1Q5SSQ6 148 aa12.99□□□□□ -0.33
CBWD3-204ENST00000377349 ARL2-SNX15V9GYD0 113 aa12.99□□□□□ -0.33
CBWD3-204ENST00000377349 MAP1LC3B2A6NCE7 125 aa12.98□□□□□ -0.33
CBWD3-204ENST00000377349 EVI2AP22794 236 aa12.98□□□□□ -0.33
CBWD3-204ENST00000377349 CDPF1Q6NVV7 123 aa12.98□□□□□ -0.33
CBWD3-204ENST00000377349 MAP1LC3BQ9GZQ8 125 aa12.98□□□□□ -0.33
CBWD3-204ENST00000377349 G3V3Q6 166 aa12.97□□□□□ -0.33
CBWD3-204ENST00000377349 GATA1P15976 413 aaPredicted RBP12.97□□□□□ -0.33
CBWD3-204ENST00000377349 KRTAP10-1P60331 282 aa12.97□□□□□ -0.33
CBWD3-204ENST00000377349 ERVFC1-1P60608 527 aa12.97□□□□□ -0.33
CBWD3-204ENST00000377349 ZNF506Q5JVG8 444 aa12.97□□□□□ -0.33
CBWD3-204ENST00000377349 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
CBWD3-204ENST00000377349 DPPA3Q6W0C5 159 aa12.97□□□□□ -0.33
CBWD3-204ENST00000377349 A0A087WTM6 91 aa12.96□□□□□ -0.33
CBWD3-204ENST00000377349 PGPEP1LA6NFU8 196 aa12.96□□□□□ -0.33
CBWD3-204ENST00000377349 EREGO14944 169 aa12.96□□□□□ -0.33
CBWD3-204ENST00000377349 Q86TA4 180 aa12.96□□□□□ -0.33
CBWD3-204ENST00000377349 PRADC1Q9BSG0 188 aa12.96□□□□□ -0.33
CBWD3-204ENST00000377349 A0A1B0GV50 99 aa12.96□□□□□ -0.34
CBWD3-204ENST00000377349 FAM74A7A6NL05 159 aa12.96□□□□□ -0.34
CBWD3-204ENST00000377349 CRYGDP07320 174 aa12.96□□□□□ -0.34
CBWD3-204ENST00000377349 UBE2G1P62253 170 aa12.96□□□□□ -0.34
CBWD3-204ENST00000377349 CST9LP1Q5W188 147 aa12.96□□□□□ -0.34
CBWD3-204ENST00000377349 SLC25A29Q8N8R3 303 aa12.96□□□□□ -0.34
CBWD3-204ENST00000377349 C9orf85Q96MD7 179 aa12.96□□□□□ -0.34
CBWD3-204ENST00000377349 M0R036 132 aa12.95□□□□□ -0.34
CBWD3-204ENST00000377349 RS1O15537 224 aa12.95□□□□□ -0.34
CBWD3-204ENST00000377349 ASIPP42127 132 aa12.95□□□□□ -0.34
CBWD3-204ENST00000377349 RHOHQ15669 191 aa12.95□□□□□ -0.34
CBWD3-204ENST00000377349 LGALSLQ3ZCW2 172 aaPredicted RBP12.95□□□□□ -0.34
CBWD3-204ENST00000377349 NFE4Q86UQ8 179 aa12.95□□□□□ -0.34
CBWD3-204ENST00000377349 CYTL1Q9NRR1 136 aa12.95□□□□□ -0.34
CBWD3-204ENST00000377349 MSRB1Q9NZV6 116 aa12.95□□□□□ -0.34
CBWD3-204ENST00000377349 B4DEV8 164 aa12.94□□□□□ -0.34
CBWD3-204ENST00000377349 RNASE3P12724 160 aaKnown RBP12.94□□□□□ -0.34
CBWD3-204ENST00000377349 FHITP49789 147 aa12.94□□□□□ -0.34
CBWD3-204ENST00000377349 OR10J3Q5JRS4 329 aa12.94□□□□□ -0.34
CBWD3-204ENST00000377349 SH2D6Q7Z4S9 175 aa12.94□□□□□ -0.34
CBWD3-204ENST00000377349 STOML3Q8TAV4 291 aa12.94□□□□□ -0.34
CBWD3-204ENST00000377349 FABP5P3A8MUU1 101 aa12.93□□□□□ -0.34
CBWD3-204ENST00000377349 H3BVH4 76 aa12.93□□□□□ -0.34
CBWD3-204ENST00000377349 INAFM2P0DMQ5 153 aa12.93□□□□□ -0.34
CBWD3-204ENST00000377349 Q5VSD8 79 aa12.93□□□□□ -0.34
CBWD3-204ENST00000377349 HIST1H2BAQ96A08 127 aa12.93□□□□□ -0.34
CBWD3-204ENST00000377349 NKX6-2Q9C056 277 aaPredicted RBP12.93□□□□□ -0.34
CBWD3-204ENST00000377349 TMSB15BA0A087X1C1 80 aa12.92□□□□□ -0.34
CBWD3-204ENST00000377349 IGKV3D-20A0A0C4DH25 116 aa12.92□□□□□ -0.34
CBWD3-204ENST00000377349 FAM213BQ8TBF2 198 aa12.92□□□□□ -0.34
CBWD3-204ENST00000377349 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
CBWD3-204ENST00000377349 TRAV8-6A0A0B4J262 113 aa12.91□□□□□ -0.34
CBWD3-204ENST00000377349 GRIFINA4D1Z8 144 aa12.91□□□□□ -0.34
CBWD3-204ENST00000377349 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
CBWD3-204ENST00000377349 TRBV6-4A0A1B0GX49 114 aa12.9□□□□□ -0.34
CBWD3-204ENST00000377349 MGST1P10620 155 aaKnown RBP12.9□□□□□ -0.34
CBWD3-204ENST00000377349 AKR1C3P42330 323 aa12.9□□□□□ -0.34
CBWD3-204ENST00000377349 FMC1Q96HJ9 113 aa12.9□□□□□ -0.34
CBWD3-204ENST00000377349 ZNF471Q9BX82 626 aaPredicted RBP12.9□□□□□ -0.34
CBWD3-204ENST00000377349 Q9HAA7 133 aa12.9□□□□□ -0.34
CBWD3-204ENST00000377349 GAGE12JA6NER3 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 PSCAO43653 123 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 SH2D1AO60880 128 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 IGHV3-30P01768 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 IGHV3-33P01772 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 IGHV3-30-3P0DP02 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 IGHV3-30-5P0DP03 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 GAGE1Q13065 139 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 GAGE4Q13068 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 GAGE5Q13069 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 GAGE13Q4V321 117 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 SFT2D1Q8WV19 159 aa12.89□□□□□ -0.35
CBWD3-204ENST00000377349 KANTRA0A1W2PQU2 76 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 K7EP13 123 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 CIDEAO60543 219 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 PAGE4O60829 102 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 FAM162BQ5T6X4 162 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 FAM74A4Q5TZK3 123 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 KCNRGQ8N5I3 272 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 SYT8Q8NBV8 401 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 ATP6V0E2Q8NHE4 81 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 PARLQ9H300 379 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 JPT2Q9H910 190 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 A8MWV9 139 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 ZFP30Q9Y2G7 519 aa12.88□□□□□ -0.35
CBWD3-204ENST00000377349 PFDN1O60925 122 aa12.87□□□□□ -0.35
CBWD3-204ENST00000377349 ARMS2P0C7Q2 107 aa12.87□□□□□ -0.35
CBWD3-204ENST00000377349 CRIP1P50238 77 aa12.87□□□□□ -0.35
CBWD3-204ENST00000377349 ZNF345Q14585 488 aa12.87□□□□□ -0.35
CBWD3-204ENST00000377349 Q6ZSN1 163 aa12.87□□□□□ -0.35
CBWD3-204ENST00000377349 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
CBWD3-204ENST00000377349 FRZBQ92765 325 aa12.87□□□□□ -0.35
CBWD3-204ENST00000377349 KRBOX1C9JBD0 128 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 M0R381 172 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 BCL2L11O43521 198 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 PTH2Q96A98 100 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 SAMD10Q9BYL1 202 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 IL36BQ9NZH7 164 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 PHLDA3Q9Y5J5 127 aa12.86□□□□□ -0.35
CBWD3-204ENST00000377349 SMR3BP02814 79 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms