RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
HDAC6-204ENST00000376643 TNFSF18Q9UNG2 199 aa9.93□□□□□ -0.82
HDAC6-204ENST00000376643 BORCS7-ASMTA0A0B4J1R7 106 aa9.92□□□□□ -0.82
HDAC6-204ENST00000376643 A0A1W2PRE2 83 aa9.92□□□□□ -0.82
HDAC6-204ENST00000376643 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-204ENST00000376643 SUMO1P63165 101 aaKnown RBP9.92□□□□□ -0.82
HDAC6-204ENST00000376643 PRNTQ86SH4 94 aa9.92□□□□□ -0.82
HDAC6-204ENST00000376643 NKX6-2Q9C056 277 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-204ENST00000376643 A0A087WWC5 75 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 TRAV8-3A0A0A6YYJ7 113 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 C1QBP02746 253 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 ATP6V0CP27449 155 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 FGF8P55075 233 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-204ENST00000376643 ZNF506Q5JVG8 444 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 INO80EQ8NBZ0 244 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-204ENST00000376643 SGK494Q96LW2 274 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 MED28Q9H204 178 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 COX11Q9Y6N1 276 aa9.91□□□□□ -0.82
HDAC6-204ENST00000376643 LRCOL1A6NCL2 159 aa9.9□□□□□ -0.82
HDAC6-204ENST00000376643 RHODO00212 210 aa9.9□□□□□ -0.82
HDAC6-204ENST00000376643 FUSP35637 526 aaKnown RBP eCLIP9.9□□□□□ -0.82
HDAC6-204ENST00000376643 ASIPP42127 132 aa9.9□□□□□ -0.82
HDAC6-204ENST00000376643 Q8N814 137 aa9.9□□□□□ -0.82
HDAC6-204ENST00000376643 SYT8Q8NBV8 401 aa9.9□□□□□ -0.82
HDAC6-204ENST00000376643 Q9HAA7 133 aa9.9□□□□□ -0.82
HDAC6-204ENST00000376643 ALG5Q9Y673 324 aa9.9□□□□□ -0.82
HDAC6-204ENST00000376643 FABP5P3A8MUU1 101 aa9.89□□□□□ -0.83
HDAC6-204ENST00000376643 GGTLC3B5MD39 225 aa9.89□□□□□ -0.83
HDAC6-204ENST00000376643 PTTG1O95997 202 aa9.89□□□□□ -0.83
HDAC6-204ENST00000376643 IFNA7P01567 189 aa9.89□□□□□ -0.83
HDAC6-204ENST00000376643 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-204ENST00000376643 RMI2Q96E14 147 aa9.89□□□□□ -0.83
HDAC6-204ENST00000376643 IGHV3-73A0A0B4J1V6 119 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 PGPEP1LA6NFU8 196 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 IGLV2-11P01706 119 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 IGHV3-30P01768 117 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 IGHV3-30-5P0DP03 117 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 RNASE3P12724 160 aaKnown RBP9.88□□□□□ -0.83
HDAC6-204ENST00000376643 LGALSLQ3ZCW2 172 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-204ENST00000376643 Q6ZSN1 163 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 HIST1H2BAQ96A08 127 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 PARLQ9H300 379 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 IL36BQ9NZH7 164 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 URGCP-MRPS24S4R325 110 aa9.88□□□□□ -0.83
HDAC6-204ENST00000376643 CTXND1A0A1B0GTU2 59 aa9.87□□□□□ -0.83
HDAC6-204ENST00000376643 GIPP09681 153 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-204ENST00000376643 DPPA3Q6W0C5 159 aa9.87□□□□□ -0.83
HDAC6-204ENST00000376643 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
HDAC6-204ENST00000376643 C11orf21Q9P2W6 132 aa9.87□□□□□ -0.83
HDAC6-204ENST00000376643 AKR1C8PQ5T2L2 129 aa9.86□□□□□ -0.83
HDAC6-204ENST00000376643 KCNIP4Q6PIL6 250 aa9.86□□□□□ -0.83
HDAC6-204ENST00000376643 ZFP30Q9Y2G7 519 aa9.86□□□□□ -0.83
HDAC6-204ENST00000376643 ARL2-SNX15V9GYD0 113 aa9.86□□□□□ -0.83
HDAC6-204ENST00000376643 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-204ENST00000376643 B4DEV8 164 aa9.85□□□□□ -0.83
HDAC6-204ENST00000376643 PEX7O00628 323 aa9.85□□□□□ -0.83
HDAC6-204ENST00000376643 OR11H4Q8NGC9 324 aa9.85□□□□□ -0.83
HDAC6-204ENST00000376643 IGKV3D-20A0A0C4DH25 116 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 GAGE12JA6NER3 117 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 GAGE1Q13065 139 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 GAGE4Q13068 117 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 GAGE5Q13069 117 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 ELOBQ15370 118 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 GAGE13Q4V321 117 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 DNLZQ5SXM8 178 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 Q86TA4 180 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 STOML3Q8TAV4 291 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 FMC1Q96HJ9 113 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
HDAC6-204ENST00000376643 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-204ENST00000376643 PLA2G1BP04054 148 aaKnown RBP9.83□□□□□ -0.84
HDAC6-204ENST00000376643 LINC00694P0DN24 101 aa9.83□□□□□ -0.84
HDAC6-204ENST00000376643 UBE2G1P62253 170 aa9.83□□□□□ -0.84
HDAC6-204ENST00000376643 FAM162BQ5T6X4 162 aa9.83□□□□□ -0.84
HDAC6-204ENST00000376643 LINC00479Q96M42 142 aa9.83□□□□□ -0.84
HDAC6-204ENST00000376643 PHLDA3Q9Y5J5 127 aa9.83□□□□□ -0.84
HDAC6-204ENST00000376643 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
HDAC6-204ENST00000376643 TRAV34A0A0B4J273 112 aa9.82□□□□□ -0.84
HDAC6-204ENST00000376643 TRBV10-1A0A0K0K1A3 114 aa9.82□□□□□ -0.84
HDAC6-204ENST00000376643 H3BVH4 76 aa9.82□□□□□ -0.84
HDAC6-204ENST00000376643 TPT1P13693 172 aaKnown RBP9.82□□□□□ -0.84
HDAC6-204ENST00000376643 RPL7L1Q6DKI1 246 aaKnown RBP9.82□□□□□ -0.84
HDAC6-204ENST00000376643 COX8CQ7Z4L0 72 aa9.82□□□□□ -0.84
HDAC6-204ENST00000376643 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.82□□□□□ -0.84
HDAC6-204ENST00000376643 OR2T35Q8NGX2 323 aa9.82□□□□□ -0.84
HDAC6-204ENST00000376643 FAM74A7A6NL05 159 aa9.81□□□□□ -0.84
HDAC6-204ENST00000376643 UBE2G2P60604 165 aa9.81□□□□□ -0.84
HDAC6-204ENST00000376643 ZFP82Q8N141 532 aa9.81□□□□□ -0.84
HDAC6-204ENST00000376643 Q8N976 141 aa9.81□□□□□ -0.84
HDAC6-204ENST00000376643 A0A087WX48 190 aa9.8□□□□□ -0.84
HDAC6-204ENST00000376643 TRBV6-1A0A0K0K1D8 114 aa9.8□□□□□ -0.84
HDAC6-204ENST00000376643 KRBOX1C9JBD0 128 aa9.8□□□□□ -0.84
HDAC6-204ENST00000376643 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
HDAC6-204ENST00000376643 FHITP49789 147 aa9.8□□□□□ -0.84
HDAC6-204ENST00000376643 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
HDAC6-204ENST00000376643 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
HDAC6-204ENST00000376643 UFSP1Q6NVU6 142 aa9.8□□□□□ -0.84
HDAC6-204ENST00000376643 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms