RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 AJUBAQ96IF1 538 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 SPART-AS1P0CW21 52 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 ICOSQ9Y6W8 199 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 FOXI2Q6ZQN5 318 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 CAMK2N2Q96S95 79 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 IGHV4OR15-8A0A075B7B6 117 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 A0A087WW49 117 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 PCP2Q8IVA1 136 aa11.5□□□□□ -0.57
NOTCH4-201ENST00000375023 SIP14410 1827 aa11.49□□□□□ -0.57
NOTCH4-201ENST00000375023 IGHV2-70P01814 119 aa11.49□□□□□ -0.57
NOTCH4-201ENST00000375023 TRAV13-2A0A0B4J235 113 aa11.49□□□□□ -0.57
NOTCH4-201ENST00000375023 ARHGAP21Q5T5U3 1957 aa11.49□□□□□ -0.57
NOTCH4-201ENST00000375023 ELANEP08246 267 aa11.49□□□□□ -0.57
NOTCH4-201ENST00000375023 KIF26AQ9ULI4 1882 aaPredicted RBP11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 CENPVL3A0A0U1RRI6 287 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 F8VRH5 84 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 MSRB1Q9NZV6 116 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 COX8AP10176 69 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 RETNQ9HD89 108 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 ETDCA0A1B0GVM5 59 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 TMEM14CQ9P0S9 112 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 INAFM2P0DMQ5 153 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 SEM1Q6ZVN7 128 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 ZNF843Q8N446 348 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 OR11H6Q8NGC7 330 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 DENND4AQ7Z401 1863 aa11.48□□□□□ -0.57
NOTCH4-201ENST00000375023 IGLC7A0M8Q6 106 aa11.47□□□□□ -0.57
NOTCH4-201ENST00000375023 CHKB-CPT1BH3BT56 60 aa11.47□□□□□ -0.57
NOTCH4-201ENST00000375023 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
NOTCH4-201ENST00000375023 LY6G6DO95868 133 aa11.47□□□□□ -0.57
NOTCH4-201ENST00000375023 C11orf45Q8TAV5 145 aa11.47□□□□□ -0.57
NOTCH4-201ENST00000375023 BAALC-AS2P0C853 105 aa11.47□□□□□ -0.57
NOTCH4-201ENST00000375023 LTAP01374 205 aa11.46□□□□□ -0.57
NOTCH4-201ENST00000375023 A0A1W2PPM0 123 aa11.46□□□□□ -0.57
NOTCH4-201ENST00000375023 CDPF1Q6NVV7 123 aa11.46□□□□□ -0.57
NOTCH4-201ENST00000375023 CITED1Q99966 193 aa11.46□□□□□ -0.57
NOTCH4-201ENST00000375023 UBE2D1P51668 147 aa11.46□□□□□ -0.57
NOTCH4-201ENST00000375023 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
NOTCH4-201ENST00000375023 IFITM1P13164 125 aa11.46□□□□□ -0.58
NOTCH4-201ENST00000375023 LINC00311Q8N616 119 aa11.46□□□□□ -0.58
NOTCH4-201ENST00000375023 DEFB125Q8N687 156 aa11.46□□□□□ -0.58
NOTCH4-201ENST00000375023 TRBV20-1A0A075B6N2 111 aa11.46□□□□□ -0.58
NOTCH4-201ENST00000375023 LGALS9BQ3B8N2 356 aa11.46□□□□□ -0.58
NOTCH4-201ENST00000375023 LGALS9CQ6DKI2 356 aa11.46□□□□□ -0.58
NOTCH4-201ENST00000375023 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 CCL25O15444 150 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 RPL39P62891 51 aaKnown RBP11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 LINC00173Q6ZV60 143 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 C11orf53Q8IXP5 236 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 SPATA25Q9BR10 227 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 CT83Q5H943 113 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 PPDPFLQ8WWR9 84 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 SMR3AQ99954 134 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 K7EQD1 137 aa11.45□□□□□ -0.58
NOTCH4-201ENST00000375023 MRPL52Q86TS9 123 aaKnown RBP11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 FGF23Q9GZV9 251 aaPredicted RBP11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 K7EP13 123 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 LECT2O14960 151 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 SLC25A29Q8N8R3 303 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 UBE2D4Q9Y2X8 147 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 IGHV7-81A0A0B4J1V7 117 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 IGKV3D-7A0A0C4DH55 119 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
NOTCH4-201ENST00000375023 NOTCH4Q99466 2003 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 K7EP34 96 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 ANKRD29Q8N6D5 301 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 RBM3P98179 157 aaKnown RBP11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 C9orf47Q6ZRZ4 202 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 GPR179Q6PRD1 2367 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 MED13Q9UHV7 2174 aa11.43□□□□□ -0.58
NOTCH4-201ENST00000375023 WISP2O76076 250 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 ADORA2A-AS1P86434 159 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 TMEM190Q8WZ59 177 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 ORMDL1Q9P0S3 153 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 TNRC6BQ9UPQ9 1833 aaKnown RBP11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 ANAPC1Q9H1A4 1944 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 PYGO2Q9BRQ0 406 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 PCNX2A6NKB5 2137 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 FAM231DQ6ZW35 169 aa11.42□□□□□ -0.58
NOTCH4-201ENST00000375023 TRBV12-3P01733 135 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 PIP4P1Q86T03 277 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 ZFP2Q6ZN57 461 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 COX7A2LO14548 114 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 HRCT1Q6UXD1 115 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 Q8N1Y9 231 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 UTF1Q5T230 341 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 SH2D6Q7Z4S9 175 aa11.41□□□□□ -0.58
NOTCH4-201ENST00000375023 HHLA3Q9XRX5 114 aa11.4□□□□□ -0.58
NOTCH4-201ENST00000375023 A0A0J9YXV3 536 aa11.4□□□□□ -0.58
NOTCH4-201ENST00000375023 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
NOTCH4-201ENST00000375023 PLXNA2O75051 1894 aa11.4□□□□□ -0.58
NOTCH4-201ENST00000375023 F8W1H4 67 aa11.4□□□□□ -0.58
NOTCH4-201ENST00000375023 TTTY13Q9BZ97 58 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms