RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 IGLC3P0DOY3 106 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 GAGE5Q13069 117 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 GAGE6Q13070 117 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 LCN12Q6JVE5 192 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 ZNF705AQ6ZN79 300 aaPredicted RBP3.61□□□□□ -1.83
USP48-202ENST00000374730 PIFOQ8TCI5 191 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 METTL26Q96S19 204 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 CCL19Q99731 98 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 TMEM70Q9BUB7 260 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 CNFNQ9BYD5 112 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 SCRT2Q9NQ03 307 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 U3KQK5 164 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 COL12A1Q99715 3063 aa3.61□□□□□ -1.83
USP48-202ENST00000374730 CELSR1Q9NYQ6 3014 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 TRAV40A0A0B4J280 105 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 A0A0U1RRA0 63 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 A6NDX4 124 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 G3V318 75 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 SYS1-DBNDD2H3BUS1 97 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 LEPROTL1O95214 131 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 HLA-DMBP28068 263 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 ZNF80P51504 273 aaPredicted RBP3.6□□□□□ -1.83
USP48-202ENST00000374730 LINC01547P58512 204 aaPredicted RBP3.6□□□□□ -1.83
USP48-202ENST00000374730 HIST1H1AQ02539 215 aaPredicted RBP3.6□□□□□ -1.83
USP48-202ENST00000374730 ATP5G2Q06055 141 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 FAM104BQ5XKR9 115 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 CLEC2AQ6UVW9 174 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 LYZL1Q6UWQ5 148 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 CLEC19AQ6UXS0 136 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 FER1L6-AS1Q8NA97 138 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 Q8TAT8 98 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 VGLL1Q99990 258 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 TMEM191AQ9H0A3 160 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 ST20Q9HBF5 79 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 HSPB8Q9UJY1 196 aa3.6□□□□□ -1.83
USP48-202ENST00000374730 AKAP9Q99996 3911 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 SVEP1Q4LDE5 3571 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 SPTAN1Q13813 2472 aaKnown RBP3.59□□□□□ -1.83
USP48-202ENST00000374730 MYO9AB2RTY4 2548 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 TRAV8-2A0A0B4J237 113 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 OR4C46A6NHA9 309 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 FABP5P3A8MUU1 101 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 NDUFA4O00483 81 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 IGHG2P01859 326 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 MSMBP08118 114 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 HNRNPA3P51991 378 aaKnown RBP3.59□□□□□ -1.83
USP48-202ENST00000374730 ZNF138P52744 262 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 LINC01545Q5VT33 79 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 FA2HQ7L5A8 372 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 SPATA12Q7Z6I5 190 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 ORMDL3Q8N138 153 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 OR10AG1Q8NH19 301 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 USMG5Q96IX5 58 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 MAP1LC3CQ9BXW4 147 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 LAMTOR2Q9Y2Q5 125 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 MRPS16Q9Y3D3 137 aaKnown RBP3.59□□□□□ -1.83
USP48-202ENST00000374730 LENEPQ9Y5L5 61 aa3.59□□□□□ -1.83
USP48-202ENST00000374730 CRYBG3Q68DQ2 2970 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 IGHV4-30-2A0A087WSY4 118 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 TMSB15BA0A087X1C1 80 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 IGHV3-35A0A0C4DH35 117 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 TMEM213A2RRL7 107 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 TMEM89A2RUT3 159 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 LINC01546A6NGU7 62 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 D6R8Y8 96 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 TCAPO15273 167 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 PPBPP02775 128 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 TRGV3P03979 118 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 IGHV4-38-2P0DP08 117 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 IGLL1P15814 213 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 SLC25A16P16260 332 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 TSPOP30536 169 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 ATP5J2P56134 94 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 MRPL51Q4U2R6 128 aaKnown RBP3.58□□□□□ -1.84
USP48-202ENST00000374730 COL5A1-AS1Q5SY13 56 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 TMEM78Q5T7P6 136 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 BRD3OSQ6XYD6 125 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 Q6ZN92 141 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 LINC00173Q6ZV60 143 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 AMN1Q8IY45 258 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 PRELID3AQ96N28 172 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 MS4A6AQ9H2W1 248 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 SIGLEC8Q9NYZ4 499 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 DNHD1Q96M86 4753 aa3.58□□□□□ -1.84
USP48-202ENST00000374730 NBPF19A0A087WUL8 3843 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 IGHV4-4A0A075B6R2 117 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 IGHV3OR16-10A0A075B7F0 116 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 IGHV3OR16-8A0A075B7F1 116 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 A0A096LNJ9 63 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 IGKV3D-20A0A0C4DH25 116 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 IGHV3-66A0A0C4DH42 116 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 A0A0G2JLM5 398 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 TRBV7-9A0A0J9YWB2 115 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 B4DSR2 109 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 HSBP1L1C9JCN9 74 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 H3BUX3 64 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 SOCS3O14543 225 aa3.57□□□□□ -1.84
USP48-202ENST00000374730 OVOL1O14753 267 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms