RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 A4D1N5 150 aa11.09□□□□□ -0.63
LMX1B-202ENST00000373474 GNRH2O43555 120 aa11.09□□□□□ -0.63
LMX1B-202ENST00000373474 ANKRD39Q53RE8 183 aa11.08□□□□□ -0.64
LMX1B-202ENST00000373474 LINC00643Q86TS7 51 aa11.08□□□□□ -0.64
LMX1B-202ENST00000373474 K7EIM0 57 aa11.08□□□□□ -0.64
LMX1B-202ENST00000373474 FAM167A-AS1Q96KT0 104 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 ELANEP08246 267 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 IGLV2-23P01705 113 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 MAPK1IP1LQ8NDC0 245 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 FXYD2P54710 66 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 SND1-IT1Q9HBX3 110 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 V9GYY9 64 aa11.07□□□□□ -0.64
LMX1B-202ENST00000373474 DOCK9Q9BZ29 2069 aa11.06□□□□□ -0.64
LMX1B-202ENST00000373474 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
LMX1B-202ENST00000373474 ANGP03950 147 aaKnown RBP11.06□□□□□ -0.64
LMX1B-202ENST00000373474 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
LMX1B-202ENST00000373474 PROP1O75360 226 aa11.06□□□□□ -0.64
LMX1B-202ENST00000373474 DKK4Q9UBT3 224 aa11.06□□□□□ -0.64
LMX1B-202ENST00000373474 PDE6GP18545 87 aa11.06□□□□□ -0.64
LMX1B-202ENST00000373474 Q96MF0 132 aa11.06□□□□□ -0.64
LMX1B-202ENST00000373474 WI2-2373I1.2A0A1W2PRP0 233 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 DEFB105AQ8NG35 78 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 DOCK11Q5JSL3 2073 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 UQCRQO14949 82 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 WT1P19544 449 aaPredicted RBP11.05□□□□□ -0.64
LMX1B-202ENST00000373474 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 C14orf132Q9NPU4 83 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 ETDCA0A1B0GVM5 59 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
LMX1B-202ENST00000373474 RNASE13Q5GAN3 156 aaKnown RBP11.05□□□□□ -0.64
LMX1B-202ENST00000373474 ODF3L1Q8IXM7 274 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 FAM240AA0A1B0GVK7 77 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 LGALS9O00182 355 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 Q6ZUT4 128 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 GTSF1Q8WW33 167 aa11.05□□□□□ -0.64
LMX1B-202ENST00000373474 IGHV7-81A0A0B4J1V7 117 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 CENPVL3A0A0U1RRI6 287 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 APOC4P55056 127 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 PIFOQ8TCI5 191 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 SEC61GP60059 68 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 IGF2-ASQ6U949 168 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 IGKV1-17P01599 117 aa11.04□□□□□ -0.64
LMX1B-202ENST00000373474 RNF183Q96D59 192 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 LTBP2Q14767 1821 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 NDUFV3P56181 108 aaKnown RBP11.03□□□□□ -0.64
LMX1B-202ENST00000373474 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 TRIOBPQ9H2D6 2365 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 E9PLD3 99 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 PRB1P04280 392 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 UBE2BP63146 152 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 SPANXB1Q9NS25 103 aaPredicted RBP11.03□□□□□ -0.64
LMX1B-202ENST00000373474 PI4KAP42356 2102 aa11.03□□□□□ -0.64
LMX1B-202ENST00000373474 TEX22C9J3V5 150 aa11.02□□□□□ -0.65
LMX1B-202ENST00000373474 CTSGP08311 255 aa11.02□□□□□ -0.65
LMX1B-202ENST00000373474 GRNP28799 593 aaKnown RBP11.02□□□□□ -0.65
LMX1B-202ENST00000373474 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
LMX1B-202ENST00000373474 XCL1P47992 114 aa11.02□□□□□ -0.65
LMX1B-202ENST00000373474 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
LMX1B-202ENST00000373474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.01□□□□□ -0.65
LMX1B-202ENST00000373474 FAM236DA0A1B0GTK5 79 aa11.01□□□□□ -0.65
LMX1B-202ENST00000373474 IGKV2-29A2NJV5 120 aaPredicted RBP11.01□□□□□ -0.65
LMX1B-202ENST00000373474 NDUFC2-KCTD14E9PQ53 114 aa11.01□□□□□ -0.65
LMX1B-202ENST00000373474 FAM236CP0DP71 79 aa11.01□□□□□ -0.65
LMX1B-202ENST00000373474 C16orf54Q6UWD8 224 aa11.01□□□□□ -0.65
LMX1B-202ENST00000373474 TMEM256-PLSCR3K7ERE1 68 aa11.01□□□□□ -0.65
LMX1B-202ENST00000373474 C11orf86A6NJI1 115 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 PRB2P02812 416 aaPredicted RBP11□□□□□ -0.65
LMX1B-202ENST00000373474 C3orf56Q8N813 242 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 SPTSSBQ8NFR3 76 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 U3KQE9 123 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 TMEM131Q92545 1883 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 IGKV1OR2-108A0A075B7D4 117 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 HIGD2BQ4VC39 106 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 NCKAP5O14513 1909 aa11□□□□□ -0.65
LMX1B-202ENST00000373474 RNF152Q8N8N0 203 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 VPREB3Q9UKI3 123 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 CACNA1EQ15878 2313 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 MYO7BQ6PIF6 2116 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 P0C879 139 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 DEFB112Q30KQ8 113 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 DEFB121Q5J5C9 76 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 MSRB1Q9NZV6 116 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 IGHV4-28A0A0C4DH34 117 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 BUB3O43684 328 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 TOMM6Q96B49 74 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 CXCL5P42830 114 aa10.99□□□□□ -0.65
LMX1B-202ENST00000373474 TRBV12-3P01733 135 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 SPRY2O43597 315 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 CEP290O15078 2479 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 IGHV4-59P01825 116 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 ATP5EP56381 51 aaPredicted RBP10.98□□□□□ -0.65
LMX1B-202ENST00000373474 C9orf47Q6ZRZ4 202 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 C3orf22Q8N5N4 141 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 TIMM17AQ99595 171 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 SPRY4Q9C004 299 aa10.98□□□□□ -0.65
LMX1B-202ENST00000373474 HIST2H2BCQ6DN03 193 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 Q8N9W7 124 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms