RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 GNRH2O43555 120 aa13.66□□□□□ -0.22
HNF4A-203ENST00000372920 COX6B1P14854 86 aa13.66□□□□□ -0.22
HNF4A-203ENST00000372920 SOCS3O14543 225 aa13.66□□□□□ -0.22
HNF4A-203ENST00000372920 NPFFO15130 113 aa13.66□□□□□ -0.22
HNF4A-203ENST00000372920 TRBV12-3P01733 135 aa13.66□□□□□ -0.22
HNF4A-203ENST00000372920 LINC01549A6NIU2 74 aa13.65□□□□□ -0.22
HNF4A-203ENST00000372920 NDUFS8O00217 210 aa13.65□□□□□ -0.22
HNF4A-203ENST00000372920 KLHL30-AS1Q8NEE0 82 aa13.65□□□□□ -0.22
HNF4A-203ENST00000372920 FAM223BA6NKX1 122 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 F6UB75 175 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 DUSP14O95147 198 aaKnown RBP13.64□□□□□ -0.23
HNF4A-203ENST00000372920 CRYGDP07320 174 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.233e-7■■■■□ 25
HNF4A-203ENST00000372920 FAM223AQ8IWN6 122 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 TMEM238LA0A1B0GVL6 79 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 A6NJY4 79 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 RNASE3P12724 160 aaKnown RBP13.64□□□□□ -0.23
HNF4A-203ENST00000372920 PTPRQQ9UMZ3 2332 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 APOMO95445 188 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 MED14OSP0DP75 135 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 C19orf54Q5BKX5 351 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 ATP6V0BQ99437 205 aa13.64□□□□□ -0.23
HNF4A-203ENST00000372920 UBE2D1P51668 147 aa13.63□□□□□ -0.23
HNF4A-203ENST00000372920 SFTA2Q6UW10 78 aa13.63□□□□□ -0.23
HNF4A-203ENST00000372920 FAM19A4Q96LR4 140 aa13.63□□□□□ -0.23
HNF4A-203ENST00000372920 DLX4Q92988 240 aaPredicted RBP13.63□□□□□ -0.23
HNF4A-203ENST00000372920 SMCPP49901 116 aaPredicted RBP13.62□□□□□ -0.23
HNF4A-203ENST00000372920 CFAP126Q5VTH2 177 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 NBASA2RRP1 2371 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 PPP1R17O96001 155 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 TSHBP01222 138 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 RPL11P62913 178 aaKnown RBP13.62□□□□□ -0.23
HNF4A-203ENST00000372920 DEFB104AQ8WTQ1 72 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 C11orf86A6NJI1 115 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 TSPAN13O95857 204 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 EMP1P54849 157 aa13.62□□□□□ -0.23
HNF4A-203ENST00000372920 IGLV4-69A0A075B6H9 119 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 LMO4P61968 165 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 TP53TG1Q9Y2A0 90 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 IGKV3-7A0A075B6H7 116 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 LOC107984156A0A0G2JMH3 177 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 NDUFA4O00483 81 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 FOXI1Q12951 378 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 ZFP2Q6ZN57 461 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 ARL17AQ8IVW1 177 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 POM121L12Q8N7R1 296 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 BPESC1Q9GZL8 116 aa13.61□□□□□ -0.23
HNF4A-203ENST00000372920 IGHV3OR16-10A0A075B7F0 116 aa13.6□□□□□ -0.23
HNF4A-203ENST00000372920 PSMB2P49721 201 aa13.6□□□□□ -0.23
HNF4A-203ENST00000372920 CD7P09564 240 aa13.6□□□□□ -0.23
HNF4A-203ENST00000372920 LINC00315P59091 139 aa13.6□□□□□ -0.23
HNF4A-203ENST00000372920 CLEC2AQ6UVW9 174 aa13.6□□□□□ -0.23
HNF4A-203ENST00000372920 APRG1Q8IVJ8 170 aa13.6□□□□□ -0.23
HNF4A-203ENST00000372920 KIF25-AS1Q9Y6Z4 181 aa13.6□□□□□ -0.23
HNF4A-203ENST00000372920 ZFHX3Q15911 3703 aa13.59□□□□□ -0.23
HNF4A-203ENST00000372920 IGIPA6NJ69 53 aa13.59□□□□□ -0.23
HNF4A-203ENST00000372920 IGHV1-69DA0A0B4J2H0 117 aa13.58□□□□□ -0.24
HNF4A-203ENST00000372920 A0A0J9YY99 117 aa13.58□□□□□ -0.24
HNF4A-203ENST00000372920 NXPH4O95158 308 aa13.58□□□□□ -0.24
HNF4A-203ENST00000372920 NFE4Q86UQ8 179 aa13.58□□□□□ -0.24
HNF4A-203ENST00000372920 UBTD1Q9HAC8 227 aa13.58□□□□□ -0.24
HNF4A-203ENST00000372920 ATP6V0E2Q8NHE4 81 aa13.58□□□□□ -0.24
HNF4A-203ENST00000372920 PTPRZ1P23471 2315 aaPredicted RBP13.58□□□□□ -0.24
HNF4A-203ENST00000372920 IGHV3-11P01762 117 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 CRIP2P52943 208 aaPredicted RBP13.57□□□□□ -0.24
HNF4A-203ENST00000372920 UBE2D3P61077 147 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 HERVK_113P61574 105 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 UBE2D2P62837 147 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 JPT2Q9H910 190 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 IGHV4OR15-8A0A075B7B6 117 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 A0A087WW49 117 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 RPL39P62891 51 aaKnown RBP13.57□□□□□ -0.24
HNF4A-203ENST00000372920 PMVKQ15126 192 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 A0A1B0GV72 72 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 NDUFA11Q86Y39 141 aa13.57□□□□□ -0.24
HNF4A-203ENST00000372920 ZNF418Q8TF45 676 aaPredicted RBP13.57□□□□□ -0.24
HNF4A-203ENST00000372920 NBL1P41271 181 aa13.56□□□□□ -0.24
HNF4A-203ENST00000372920 PAPPA-AS1Q5QFB9 102 aa13.56□□□□□ -0.24
HNF4A-203ENST00000372920 SYT8Q8NBV8 401 aa13.56□□□□□ -0.24
HNF4A-203ENST00000372920 POLR2KP53803 58 aaKnown RBP13.56□□□□□ -0.24
HNF4A-203ENST00000372920 RPL32P62910 135 aaKnown RBP13.56□□□□□ -0.24
HNF4A-203ENST00000372920 SUMO4Q6EEV6 95 aa13.56□□□□□ -0.24
HNF4A-203ENST00000372920 Q6ZS46 218 aa13.56□□□□□ -0.24
HNF4A-203ENST00000372920 TSPEAR-AS2P59090 65 aa13.56□□□□□ -0.24
HNF4A-203ENST00000372920 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
HNF4A-203ENST00000372920 PTH2Q96A98 100 aa13.55□□□□□ -0.24
HNF4A-203ENST00000372920 A0A087WWL8 130 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 TRBV7-9A0A0J9YWB2 115 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 RHPN1-AS1Q9BWJ2 59 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 CDIP1Q9H305 208 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 MUC4Q99102 2169 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 VCYO14598 125 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 SRD5A1P18405 259 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 KLRB1Q12918 225 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 TMEM170BQ5T4T1 132 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 TMEM141Q96I45 108 aa13.54□□□□□ -0.24
HNF4A-203ENST00000372920 KIR2DL4Q99706 377 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms