RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 FAM19A4Q96LR4 140 aa14.46□□□□□ -0.1
TMEM53-202ENST00000372237 RHPN1-AS1Q9BWJ2 59 aa14.46□□□□□ -0.1
TMEM53-202ENST00000372237 GNRH2O43555 120 aa14.45□□□□□ -0.1
TMEM53-202ENST00000372237 SLC25A16P16260 332 aa14.45□□□□□ -0.1
TMEM53-202ENST00000372237 BLCAPP62952 87 aa14.45□□□□□ -0.1
TMEM53-202ENST00000372237 LCNL1Q6ZST4 164 aa14.45□□□□□ -0.1
TMEM53-202ENST00000372237 MED14OSP0DP75 135 aa14.44□□□□□ -0.1
TMEM53-202ENST00000372237 CHTOPQ9Y3Y2 248 aaKnown RBP14.44□□□□□ -0.1
TMEM53-202ENST00000372237 SPG11Q96JI7 2443 aa14.44□□□□□ -0.1
TMEM53-202ENST00000372237 K7EMI3 77 aa14.44□□□□□ -0.1
TMEM53-202ENST00000372237 SPOCK3Q9BQ16 436 aa14.44□□□□□ -0.1
TMEM53-202ENST00000372237 A6NDX4 124 aa14.43□□□□□ -0.1
TMEM53-202ENST00000372237 RNASE3P12724 160 aaKnown RBP14.43□□□□□ -0.1
TMEM53-202ENST00000372237 APRG1Q8IVJ8 170 aa14.43□□□□□ -0.1
TMEM53-202ENST00000372237 PRB1P04280 392 aa14.43□□□□□ -0.1
TMEM53-202ENST00000372237 Q6ZS46 218 aa14.43□□□□□ -0.1
TMEM53-202ENST00000372237 PHLDA1Q8WV24 401 aaPredicted RBP14.43□□□□□ -0.1
TMEM53-202ENST00000372237 CCL19Q99731 98 aa14.43□□□□□ -0.1
TMEM53-202ENST00000372237 DAZ1Q9NQZ3 744 aaKnown RBP14.43□□□□□ -0.1
TMEM53-202ENST00000372237 C2orf66Q6UXQ4 117 aa14.42□□□□□ -0.1
TMEM53-202ENST00000372237 NEXN-AS1Q8NBZ9 246 aa14.42□□□□□ -0.1
TMEM53-202ENST00000372237 C10orf105Q8TEF2 133 aa14.42□□□□□ -0.1
TMEM53-202ENST00000372237 ZNF462Q96JM2 2506 aa14.42□□□□□ -0.1
TMEM53-202ENST00000372237 TRBV7-9A0A0J9YWB2 115 aa14.42□□□□□ -0.1
TMEM53-202ENST00000372237 TAL2Q16559 108 aa14.42□□□□□ -0.1
TMEM53-202ENST00000372237 SRD5A1P18405 259 aa14.41□□□□□ -0.1
TMEM53-202ENST00000372237 BBC3Q96PG8 261 aaPredicted RBP14.41□□□□□ -0.1
TMEM53-202ENST00000372237 OR11H12B2RN74 326 aa14.41□□□□□ -0.1
TMEM53-202ENST00000372237 RNF223E7ERA6 249 aa14.41□□□□□ -0.1
TMEM53-202ENST00000372237 OR11H1Q8NG94 326 aa14.41□□□□□ -0.1
TMEM53-202ENST00000372237 OR11H2Q8NH07 326 aa14.41□□□□□ -0.1
TMEM53-202ENST00000372237 HIST1H4GQ99525 98 aa14.41□□□□□ -0.1
TMEM53-202ENST00000372237 PPP1R17O96001 155 aa14.4□□□□□ -0.1
TMEM53-202ENST00000372237 CLEC2AQ6UVW9 174 aa14.4□□□□□ -0.1
TMEM53-202ENST00000372237 NEGR1Q7Z3B1 354 aa14.4□□□□□ -0.1
TMEM53-202ENST00000372237 IGLV1-40P01703 118 aa14.4□□□□□ -0.11
TMEM53-202ENST00000372237 BAALCQ8WXS3 180 aa14.4□□□□□ -0.11
TMEM53-202ENST00000372237 AGRNO00468 2067 aa14.4□□□□□ -0.11
TMEM53-202ENST00000372237 NDUFS8O00217 210 aa14.39□□□□□ -0.11
TMEM53-202ENST00000372237 COTL1Q14019 142 aa14.39□□□□□ -0.11
TMEM53-202ENST00000372237 CSTL1Q9H114 145 aa14.39□□□□□ -0.11
TMEM53-202ENST00000372237 EPG5Q9HCE0 2579 aa14.39□□□□□ -0.11
TMEM53-202ENST00000372237 ATP5J2P56134 94 aa14.38□□□□□ -0.11
TMEM53-202ENST00000372237 FAM159AQ6UWV7 190 aa14.38□□□□□ -0.11
TMEM53-202ENST00000372237 MUC4Q99102 2169 aa14.38□□□□□ -0.11
TMEM53-202ENST00000372237 IGHV4-30-2A0A087WSY4 118 aa14.37□□□□□ -0.11
TMEM53-202ENST00000372237 MYMXA0A1B0GTQ4 84 aa14.37□□□□□ -0.11
TMEM53-202ENST00000372237 G3V4G9 280 aa14.37□□□□□ -0.11
TMEM53-202ENST00000372237 EDN2P20800 178 aa14.37□□□□□ -0.11
TMEM53-202ENST00000372237 KLLNB2CW77 178 aa14.37□□□□□ -0.11
TMEM53-202ENST00000372237 MSMBP08118 114 aa14.37□□□□□ -0.11
TMEM53-202ENST00000372237 ID1P41134 155 aa14.37□□□□□ -0.11
TMEM53-202ENST00000372237 C12orf74Q32Q52 190 aa14.36□□□□□ -0.11
TMEM53-202ENST00000372237 CRYBG3Q68DQ2 2970 aa14.36□□□□□ -0.11
TMEM53-202ENST00000372237 UTP20O75691 2785 aaKnown RBP14.36□□□□□ -0.11
TMEM53-202ENST00000372237 PRSS29PA6NIE9 313 aa14.36□□□□□ -0.11
TMEM53-202ENST00000372237 IGLL5B9A064 214 aa14.36□□□□□ -0.11
TMEM53-202ENST00000372237 NXPH4O95158 308 aa14.36□□□□□ -0.11
TMEM53-202ENST00000372237 POM121L12Q8N7R1 296 aa14.35□□□□□ -0.11
TMEM53-202ENST00000372237 WFDC12Q8WWY7 111 aa14.35□□□□□ -0.11
TMEM53-202ENST00000372237 KIF25-AS1Q9Y6Z4 181 aa14.35□□□□□ -0.11
TMEM53-202ENST00000372237 E9PLD3 99 aa14.35□□□□□ -0.11
TMEM53-202ENST00000372237 K7EMT4 169 aa14.35□□□□□ -0.11
TMEM53-202ENST00000372237 ZNF479Q96JC4 524 aa14.35□□□□□ -0.11
TMEM53-202ENST00000372237 TRBV7-3A0A075B6L6 115 aa14.34□□□□□ -0.11
TMEM53-202ENST00000372237 CFHR3Q02985 330 aa14.34□□□□□ -0.11
TMEM53-202ENST00000372237 DCANP1Q8TF63 244 aa14.34□□□□□ -0.11
TMEM53-202ENST00000372237 CYSLTR1Q9Y271 337 aa14.34□□□□□ -0.11
TMEM53-202ENST00000372237 FAM208BQ5VWN6 2430 aa14.34□□□□□ -0.11
TMEM53-202ENST00000372237 DUSP14O95147 198 aaKnown RBP14.33□□□□□ -0.11
TMEM53-202ENST00000372237 CD7P09564 240 aa14.33□□□□□ -0.11
TMEM53-202ENST00000372237 LINC00315P59091 139 aa14.33□□□□□ -0.11
TMEM53-202ENST00000372237 TMEM95Q3KNT9 176 aa14.33□□□□□ -0.11
TMEM53-202ENST00000372237 JPT2Q9H910 190 aa14.33□□□□□ -0.11
TMEM53-202ENST00000372237 MAP1AP78559 2803 aaPredicted RBP14.33□□□□□ -0.11
TMEM53-202ENST00000372237 LRRK2Q5S007 2527 aa14.33□□□□□ -0.11
TMEM53-202ENST00000372237 RIPPLY3P57055 190 aa14.33□□□□□ -0.12
TMEM53-202ENST00000372237 SCGB2A2Q13296 93 aa14.33□□□□□ -0.12
TMEM53-202ENST00000372237 ZNF843Q8N446 348 aa14.33□□□□□ -0.12
TMEM53-202ENST00000372237 PRADC1Q9BSG0 188 aa14.33□□□□□ -0.12
TMEM53-202ENST00000372237 IGHV4OR15-8A0A075B7B6 117 aa14.32□□□□□ -0.12
TMEM53-202ENST00000372237 A0A087WW49 117 aa14.32□□□□□ -0.12
TMEM53-202ENST00000372237 TRAV12-3A0A0B4J271 114 aa14.32□□□□□ -0.12
TMEM53-202ENST00000372237 LINC01619G3V211 115 aa14.32□□□□□ -0.12
TMEM53-202ENST00000372237 AVPP01185 164 aa14.32□□□□□ -0.12
TMEM53-202ENST00000372237 SAMD13Q5VXD3 122 aa14.32□□□□□ -0.12
TMEM53-202ENST00000372237 FOXI2Q6ZQN5 318 aa14.32□□□□□ -0.12
TMEM53-202ENST00000372237 A0A087WWL8 130 aa14.31□□□□□ -0.12
TMEM53-202ENST00000372237 F5H697 171 aa14.31□□□□□ -0.12
TMEM53-202ENST00000372237 LGALS1P09382 135 aaKnown RBP14.31□□□□□ -0.12
TMEM53-202ENST00000372237 RPL24P83731 157 aaKnown RBP14.31□□□□□ -0.12
TMEM53-202ENST00000372237 SUMO4Q6EEV6 95 aa14.31□□□□□ -0.12
TMEM53-202ENST00000372237 DEFB104AQ8WTQ1 72 aa14.31□□□□□ -0.12
TMEM53-202ENST00000372237 TP53TG1Q9Y2A0 90 aa14.31□□□□□ -0.12
TMEM53-202ENST00000372237 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.3□□□□□ -0.12
TMEM53-202ENST00000372237 CRYGDP07320 174 aa14.3□□□□□ -0.12
TMEM53-202ENST00000372237 RPL32P62910 135 aaKnown RBP14.3□□□□□ -0.12
TMEM53-202ENST00000372237 ZFP2Q6ZN57 461 aa14.3□□□□□ -0.12
TMEM53-202ENST00000372237 ZNF815PA8K554 130 aa14.3□□□□□ -0.12
TMEM53-202ENST00000372237 POLR2KP53803 58 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms