RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 PRR25Q96S07 402 aa12.21□□□□□ -0.45
GTF3C4-201ENST00000372146 C20orf204Q6ZNR8 217 aa12.21□□□□□ -0.45
GTF3C4-201ENST00000372146 SEM1Q6ZVN7 128 aa12.21□□□□□ -0.45
GTF3C4-201ENST00000372146 DKK4Q9UBT3 224 aa12.21□□□□□ -0.45
GTF3C4-201ENST00000372146 Q6ZRM9 215 aa12.21□□□□□ -0.45
GTF3C4-201ENST00000372146 H3BUX3 64 aa12.21□□□□□ -0.46
GTF3C4-201ENST00000372146 RHOHQ15669 191 aa12.21□□□□□ -0.46
GTF3C4-201ENST00000372146 NDUFB8O95169 186 aa12.21□□□□□ -0.46
GTF3C4-201ENST00000372146 C10orf105Q8TEF2 133 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 RMI2Q96E14 147 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 JMJD7-PLA2G4BH0Y9G9 81 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 SRRM5B3KS81 715 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 E9PQ18 207 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 TRBV10-2A0A0K0K1G8 114 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 C20orf197Q8N268 126 aa12.2□□□□□ -0.46
GTF3C4-201ENST00000372146 OVOL3O00110 214 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 RNF5Q99942 180 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 BRD3OSQ6XYD6 125 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 WDR86Q86TI4 376 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 SAP25Q8TEE9 199 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 C11orf52Q96A22 123 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 PTH2Q96A98 100 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 TEX49A0A1B0GTD5 131 aa12.19□□□□□ -0.46
GTF3C4-201ENST00000372146 IGKV2D-26A0A0A0MRZ7 120 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 RETNQ9HD89 108 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 ZNF581Q9P0T4 197 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 PRR30Q53SZ7 412 aaPredicted RBP12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 NCR3O14931 201 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 EIF4EBP2Q13542 120 aaPredicted RBP12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 USP17L23D6RBM5 183 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 MRPS18CQ9Y3D5 142 aaKnown RBP12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 IGKV2D-24A0A075B6R9 120 aa12.18□□□□□ -0.46
GTF3C4-201ENST00000372146 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 RBAKDNA6NC62 111 aa12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 CFHR1Q03591 330 aa12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 QRFPP83859 136 aa12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 LOXL1Q08397 574 aaPredicted RBP12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 LTAP01374 205 aa12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 ATP5EP56381 51 aaPredicted RBP12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 FANCD2OSQ96PS1 177 aa12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 RNASE6Q93091 150 aaKnown RBP12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 Q6P435 159 aa12.17□□□□□ -0.46
GTF3C4-201ENST00000372146 NDUFA7O95182 113 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 Q6ZQT7 251 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 ELANEP08246 267 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 PRDM6Q9NQX0 595 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 SPRR3Q9UBC9 169 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 IGLC6P0CF74 106 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 TRBV6-6A0A0A6YYG2 114 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 LECT2O14960 151 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 TIMM17BO60830 172 aa12.16□□□□□ -0.46
GTF3C4-201ENST00000372146 FAM120AOSQ5T036 256 aa12.15□□□□□ -0.46
GTF3C4-201ENST00000372146 LINC00643Q86TS7 51 aa12.15□□□□□ -0.46
GTF3C4-201ENST00000372146 RPL39LQ96EH5 51 aaKnown RBP12.15□□□□□ -0.46
GTF3C4-201ENST00000372146 TIRAPP58753 221 aa12.15□□□□□ -0.46
GTF3C4-201ENST00000372146 C5orf67F2Z3F1 127 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 FXYD5Q96DB9 178 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 ZNF503Q96F45 646 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 KIAA1671Q9BY89 1806 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 TCL1BO95988 128 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 F8P00451 2351 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 GAFA1Q96PS6 74 aa12.14□□□□□ -0.47
GTF3C4-201ENST00000372146 IGKV1OR2-108A0A075B7D4 117 aa12.13□□□□□ -0.47
GTF3C4-201ENST00000372146 SAA4P35542 130 aa12.13□□□□□ -0.47
GTF3C4-201ENST00000372146 CSRP3P50461 194 aa12.13□□□□□ -0.47
GTF3C4-201ENST00000372146 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
GTF3C4-201ENST00000372146 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.13□□□□□ -0.47
GTF3C4-201ENST00000372146 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
GTF3C4-201ENST00000372146 H3BT86 120 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 VOPP1Q96AW1 172 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 OOSP1A8MZH6 123 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 H3BRN7 92 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 HIST2H2BDQ6DRA6 164 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 Q71RC1 249 aaPredicted RBP12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 LINC00173Q6ZV60 143 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 IGLV10-54A0A075B6I4 117 aa12.12□□□□□ -0.47
GTF3C4-201ENST00000372146 APOC4P55056 127 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 ZFP36L1Q07352 338 aaKnown RBP12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 Q6ZS49 121 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 Q9HAA7 133 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 PMAIP1Q13794 54 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 HIGD1BQ9P298 99 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 ENHOQ6UWT2 76 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 SNURFQ9Y675 71 aa12.11□□□□□ -0.47
GTF3C4-201ENST00000372146 PIK3CD-AS1Q5SR53 167 aa12.1□□□□□ -0.47
GTF3C4-201ENST00000372146 IGKV1D-17A0A075B6S4 117 aa12.1□□□□□ -0.47
GTF3C4-201ENST00000372146 GNRH2O43555 120 aa12.1□□□□□ -0.47
GTF3C4-201ENST00000372146 IGHV4-59P01825 116 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms