RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 OR10J3Q5JRS4 329 aa19.29■□□□□ 0.68
ATPAF1-202ENST00000371937 PRR31Q5SQ13 230 aa19.29■□□□□ 0.68
ATPAF1-202ENST00000371937 Q8N1Y9 231 aa19.29■□□□□ 0.68
ATPAF1-202ENST00000371937 ALKBH7Q9BT30 221 aaPredicted RBP19.29■□□□□ 0.68
ATPAF1-202ENST00000371937 TRGV11A0A075B6L2 103 aa19.28■□□□□ 0.68
ATPAF1-202ENST00000371937 WFDC10AQ9H1F0 79 aa19.28■□□□□ 0.68
ATPAF1-202ENST00000371937 IGHV3-16A0A0C4DH30 117 aa19.28■□□□□ 0.68
ATPAF1-202ENST00000371937 TP53TG3Q9ULZ0 132 aa19.28■□□□□ 0.68
ATPAF1-202ENST00000371937 XCL2Q9UBD3 114 aa19.27■□□□□ 0.68
ATPAF1-202ENST00000371937 CBY3A6NI87 242 aa19.26■□□□□ 0.67
ATPAF1-202ENST00000371937 WIPF1O43516 503 aa19.26■□□□□ 0.67
ATPAF1-202ENST00000371937 DMRTA1Q5VZB9 504 aa19.26■□□□□ 0.67
ATPAF1-202ENST00000371937 AMN1Q8IY45 258 aa19.26■□□□□ 0.67
ATPAF1-202ENST00000371937 NOTCH3Q9UM47 2321 aa19.26■□□□□ 0.67
ATPAF1-202ENST00000371937 M0R381 172 aa19.25■□□□□ 0.67
ATPAF1-202ENST00000371937 IGLL1P15814 213 aa19.25■□□□□ 0.67
ATPAF1-202ENST00000371937 BAGE3Q86Y29 109 aa19.25■□□□□ 0.67
ATPAF1-202ENST00000371937 LINC00467Q9BRT7 94 aa19.25■□□□□ 0.67
ATPAF1-202ENST00000371937 MORN3Q6PF18 240 aaPredicted RBP19.24■□□□□ 0.67
ATPAF1-202ENST00000371937 TMEM256Q8N2U0 113 aa19.24■□□□□ 0.67
ATPAF1-202ENST00000371937 C9orf85Q96MD7 179 aa19.24■□□□□ 0.67
ATPAF1-202ENST00000371937 LINC01587Q99440 93 aa19.24■□□□□ 0.67
ATPAF1-202ENST00000371937 NXPH4O95158 308 aa19.23■□□□□ 0.67
ATPAF1-202ENST00000371937 HIST3H2BBQ8N257 126 aa19.23■□□□□ 0.67
ATPAF1-202ENST00000371937 C18orf32Q8TCD1 76 aa19.23■□□□□ 0.67
ATPAF1-202ENST00000371937 MDFICQ9P1T7 246 aa19.23■□□□□ 0.67
ATPAF1-202ENST00000371937 DEFB125Q8N687 156 aa19.23■□□□□ 0.67
ATPAF1-202ENST00000371937 C1QTNF4Q9BXJ3 329 aa19.23■□□□□ 0.67
ATPAF1-202ENST00000371937 HTN1P15515 57 aa19.22■□□□□ 0.67
ATPAF1-202ENST00000371937 EVI2AP22794 236 aa19.22■□□□□ 0.67
ATPAF1-202ENST00000371937 S100A2P29034 98 aa19.22■□□□□ 0.67
ATPAF1-202ENST00000371937 RPL35AP18077 110 aaKnown RBP19.21■□□□□ 0.67
ATPAF1-202ENST00000371937 MRPL51Q4U2R6 128 aaKnown RBP19.21■□□□□ 0.67
ATPAF1-202ENST00000371937 TMEM208Q9BTX3 173 aa19.21■□□□□ 0.67
ATPAF1-202ENST00000371937 SPRY2O43597 315 aa19.21■□□□□ 0.67
ATPAF1-202ENST00000371937 RAB4AP20338 218 aa19.21■□□□□ 0.67
ATPAF1-202ENST00000371937 PDZD11Q5EBL8 140 aa19.2■□□□□ 0.66
ATPAF1-202ENST00000371937 ORMDL3Q8N138 153 aa19.2■□□□□ 0.66
ATPAF1-202ENST00000371937 U3KQK5 164 aa19.2■□□□□ 0.66
ATPAF1-202ENST00000371937 STAB1Q9NY15 2570 aa19.19■□□□□ 0.66
ATPAF1-202ENST00000371937 SYT8Q8NBV8 401 aa19.19■□□□□ 0.66
ATPAF1-202ENST00000371937 RNF185Q96GF1 192 aa19.19■□□□□ 0.66
ATPAF1-202ENST00000371937 AP1S3Q96PC3 154 aa19.19■□□□□ 0.66
ATPAF1-202ENST00000371937 D6R8Y8 96 aa19.18■□□□□ 0.66
ATPAF1-202ENST00000371937 PPBPP02775 128 aa19.18■□□□□ 0.66
ATPAF1-202ENST00000371937 SERF1AO75920 110 aa19.18■□□□□ 0.66
ATPAF1-202ENST00000371937 CKS2P33552 79 aa19.18■□□□□ 0.66
ATPAF1-202ENST00000371937 C1orf158Q8N1D5 194 aa19.18■□□□□ 0.66
ATPAF1-202ENST00000371937 GIG44P09565 113 aaPredicted RBP19.17■□□□□ 0.66
ATPAF1-202ENST00000371937 ESDP10768 282 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 AKR1D1P51857 326 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 ZNF415Q09FC8 603 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 IQCJQ1A5X6 159 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 PRELID3AQ96N28 172 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 DPH3P1Q9H4G8 78 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 IFITM10A6NMD0 228 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 GOLT1BQ9Y3E0 138 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 TRRAPQ9Y4A5 3859 aa19.16■□□□□ 0.66
ATPAF1-202ENST00000371937 MUC4Q99102 2169 aa19.15■□□□□ 0.66
ATPAF1-202ENST00000371937 COL6A5A8TX70 2615 aa19.15■□□□□ 0.66
ATPAF1-202ENST00000371937 LINC00310P59036 64 aa19.14■□□□□ 0.65
ATPAF1-202ENST00000371937 C14orf178Q8N769 122 aaPredicted RBP19.14■□□□□ 0.65
ATPAF1-202ENST00000371937 IGHV3OR16-12A0A075B7B8 117 aa19.14■□□□□ 0.65
ATPAF1-202ENST00000371937 NUPR1O60356 82 aa19.14■□□□□ 0.65
ATPAF1-202ENST00000371937 RCHY1Q96PM5 261 aa19.14■□□□□ 0.65
ATPAF1-202ENST00000371937 SMIM17P0DL12 118 aa19.13■□□□□ 0.65
ATPAF1-202ENST00000371937 TMEM18Q96B42 140 aa19.13■□□□□ 0.65
ATPAF1-202ENST00000371937 HIST1H2BLQ99880 126 aa19.13■□□□□ 0.65
ATPAF1-202ENST00000371937 CSTL1Q9H114 145 aa19.13■□□□□ 0.65
ATPAF1-202ENST00000371937 LAMTOR2Q9Y2Q5 125 aa19.13■□□□□ 0.65
ATPAF1-202ENST00000371937 FABP4P15090 132 aa19.12■□□□□ 0.65
ATPAF1-202ENST00000371937 ZNF876PQ49A33 203 aa19.12■□□□□ 0.65
ATPAF1-202ENST00000371937 MRAP2Q96G30 205 aa19.11■□□□□ 0.65
ATPAF1-202ENST00000371937 PRM2P04554 102 aa19.11■□□□□ 0.65
ATPAF1-202ENST00000371937 C11orf72Q8NBR9 251 aa19.11■□□□□ 0.65
ATPAF1-202ENST00000371937 CSNK1G2-AS1Q8NCQ2 148 aa19.11■□□□□ 0.65
ATPAF1-202ENST00000371937 SPXQ9BT56 116 aa19.11■□□□□ 0.65
ATPAF1-202ENST00000371937 GSN-AS1Q9NRJ2 163 aa19.11■□□□□ 0.65
ATPAF1-202ENST00000371937 SMKR1H3BMG3 65 aa19.1■□□□□ 0.65
ATPAF1-202ENST00000371937 NIT1Q86X76 327 aa19.1■□□□□ 0.65
ATPAF1-202ENST00000371937 PTH2Q96A98 100 aa19.1■□□□□ 0.65
ATPAF1-202ENST00000371937 M0R2P5 195 aa19.09■□□□□ 0.65
ATPAF1-202ENST00000371937 NCR2O95944 276 aa19.09■□□□□ 0.65
ATPAF1-202ENST00000371937 PIK3CD-AS1Q5SR53 167 aa19.09■□□□□ 0.65
ATPAF1-202ENST00000371937 KIF25-AS1Q9Y6Z4 181 aa19.09■□□□□ 0.65
ATPAF1-202ENST00000371937 OXLD1Q5BKU9 147 aa19.08■□□□□ 0.64
ATPAF1-202ENST00000371937 RNASEKQ6P5S7 137 aaKnown RBP19.08■□□□□ 0.64
ATPAF1-202ENST00000371937 CHCHD1Q96BP2 118 aaKnown RBP19.08■□□□□ 0.64
ATPAF1-202ENST00000371937 ZMAT5Q9UDW3 170 aaKnown RBP19.08■□□□□ 0.64
ATPAF1-202ENST00000371937 PACRGQ96M98 296 aaPredicted RBP19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 SAMD10Q9BYL1 202 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 HSBP1O75506 76 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 NPYP01303 97 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 MGPP08493 103 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 LINC00614P0C842 121 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 AZU1P20160 251 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 POM121L12Q8N7R1 296 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 TMEM263Q8WUH6 116 aaKnown RBP19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 JPT2Q9H910 190 aa19.07■□□□□ 0.64
ATPAF1-202ENST00000371937 TNFRSF6BO95407 300 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms