RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 VOPP1Q96AW1 172 aa12.14□□□□□ -0.47
COL5A1-201ENST00000371817 C20orf197Q8N268 126 aa12.14□□□□□ -0.47
COL5A1-201ENST00000371817 NDUFA7O95182 113 aa12.14□□□□□ -0.47
COL5A1-201ENST00000371817 C1orf53Q5VUE5 145 aa12.14□□□□□ -0.47
COL5A1-201ENST00000371817 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
COL5A1-201ENST00000371817 C22orf46C9J442 243 aa12.14□□□□□ -0.47
COL5A1-201ENST00000371817 H3BRN7 92 aa12.14□□□□□ -0.47
COL5A1-201ENST00000371817 XCL2Q9UBD3 114 aa12.13□□□□□ -0.47
COL5A1-201ENST00000371817 TEX36Q5VZQ5 186 aa12.13□□□□□ -0.47
COL5A1-201ENST00000371817 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
COL5A1-201ENST00000371817 ZNF581Q9P0T4 197 aa12.13□□□□□ -0.47
COL5A1-201ENST00000371817 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
COL5A1-201ENST00000371817 H3BUX3 64 aa12.13□□□□□ -0.47
COL5A1-201ENST00000371817 RMI2Q96E14 147 aa12.12□□□□□ -0.47
COL5A1-201ENST00000371817 MRPL53Q96EL3 112 aaKnown RBP12.12□□□□□ -0.47
COL5A1-201ENST00000371817 GAFA1Q96PS6 74 aa12.12□□□□□ -0.47
COL5A1-201ENST00000371817 PRR15LQ9BU68 103 aa12.12□□□□□ -0.47
COL5A1-201ENST00000371817 ETDCA0A1B0GVM5 59 aa12.12□□□□□ -0.47
COL5A1-201ENST00000371817 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-201ENST00000371817 K7EM74 188 aa12.12□□□□□ -0.47
COL5A1-201ENST00000371817 OVOL3O00110 214 aa12.12□□□□□ -0.47
COL5A1-201ENST00000371817 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
COL5A1-201ENST00000371817 CEP192Q8TEP8 1941 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 IGKV1-39P01597 117 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 IGKV1D-39P04432 117 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 IGKV1D-17A0A075B6S4 117 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
COL5A1-201ENST00000371817 WFDC11Q8NEX6 87 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 SPRR3Q9UBC9 169 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 GGNQ86UU5 652 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 C2CD3Q4AC94 2353 aa12.11□□□□□ -0.47
COL5A1-201ENST00000371817 A6NED7 52 aa12.1□□□□□ -0.47
COL5A1-201ENST00000371817 LHBP01229 141 aa12.1□□□□□ -0.47
COL5A1-201ENST00000371817 CFHR1Q03591 330 aa12.1□□□□□ -0.47
COL5A1-201ENST00000371817 WI2-2373I1.2A0A1W2PRP0 233 aa12.1□□□□□ -0.47
COL5A1-201ENST00000371817 PRR30Q53SZ7 412 aaPredicted RBP12.1□□□□□ -0.47
COL5A1-201ENST00000371817 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
COL5A1-201ENST00000371817 NUPR1O60356 82 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 TCL1BO95988 128 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 SDIM1Q6ZPB5 146 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 DOPEY1Q5JWR5 2465 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 TEX49A0A1B0GTD5 131 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-201ENST00000371817 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-201ENST00000371817 E9PLD3 99 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 RBAKDNA6NC62 111 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 LYPD6Q86Y78 171 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 FAM110AQ9BQ89 295 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 COL11A2P13942 1736 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-201ENST00000371817 FANCD2OSQ96PS1 177 aa12.09□□□□□ -0.47
COL5A1-201ENST00000371817 IGKV1-6A0A0C4DH72 117 aa12.08□□□□□ -0.48
COL5A1-201ENST00000371817 LECT2O14960 151 aa12.08□□□□□ -0.48
COL5A1-201ENST00000371817 CGB3P0DN86 165 aa12.08□□□□□ -0.48
COL5A1-201ENST00000371817 CGB7P0DN87 165 aa12.08□□□□□ -0.48
COL5A1-201ENST00000371817 C10orf105Q8TEF2 133 aa12.08□□□□□ -0.48
COL5A1-201ENST00000371817 LINC00173Q6ZV60 143 aa12.08□□□□□ -0.48
COL5A1-201ENST00000371817 SAA4P35542 130 aa12.07□□□□□ -0.48
COL5A1-201ENST00000371817 NDUFA11Q86Y39 141 aa12.07□□□□□ -0.48
COL5A1-201ENST00000371817 ATP5EP2Q5VTU8 51 aa12.07□□□□□ -0.48
COL5A1-201ENST00000371817 SPATA12Q7Z6I5 190 aa12.07□□□□□ -0.48
COL5A1-201ENST00000371817 PIFOQ8TCI5 191 aa12.07□□□□□ -0.48
COL5A1-201ENST00000371817 ZNF833PQ6ZTB9 187 aa12.07□□□□□ -0.48
COL5A1-201ENST00000371817 IGKV4-1P06312 121 aa12.07□□□□□ -0.48
COL5A1-201ENST00000371817 MLST8Q9BVC4 326 aa12.06□□□□□ -0.48
COL5A1-201ENST00000371817 C5orf63A6NC05 138 aa12.06□□□□□ -0.48
COL5A1-201ENST00000371817 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
COL5A1-201ENST00000371817 ELANEP08246 267 aa12.06□□□□□ -0.48
COL5A1-201ENST00000371817 Q8N1Y9 231 aa12.06□□□□□ -0.48
COL5A1-201ENST00000371817 IGF2BP2-AS1Q96M15 143 aa12.05□□□□□ -0.48
COL5A1-201ENST00000371817 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
COL5A1-201ENST00000371817 DAND5Q8N907 189 aa12.05□□□□□ -0.48
COL5A1-201ENST00000371817 FAM110DQ8TAY7 271 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-201ENST00000371817 CLUHP3Q96NS8 147 aa12.05□□□□□ -0.48
COL5A1-201ENST00000371817 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-201ENST00000371817 NDUFA4O00483 81 aa12.05□□□□□ -0.48
COL5A1-201ENST00000371817 DSCR9P59020 149 aa12.05□□□□□ -0.48
COL5A1-201ENST00000371817 LENEPQ9Y5L5 61 aa12.05□□□□□ -0.48
COL5A1-201ENST00000371817 MYO18BQ8IUG5 2567 aa12.05□□□□□ -0.48
COL5A1-201ENST00000371817 ZFP36L1Q07352 338 aaKnown RBP12.04□□□□□ -0.48
COL5A1-201ENST00000371817 TIMM17BO60830 172 aa12.04□□□□□ -0.48
COL5A1-201ENST00000371817 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
COL5A1-201ENST00000371817 ATP6V0E1O15342 81 aa12.04□□□□□ -0.48
COL5A1-201ENST00000371817 RPL18AQ02543 176 aaKnown RBP12.04□□□□□ -0.48
COL5A1-201ENST00000371817 WDR86Q86TI4 376 aa12.04□□□□□ -0.48
COL5A1-201ENST00000371817 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
COL5A1-201ENST00000371817 IGKV2D-26A0A0A0MRZ7 120 aa12.04□□□□□ -0.48
COL5A1-201ENST00000371817 USP17L23D6RBM5 183 aa12.04□□□□□ -0.48
COL5A1-201ENST00000371817 DAZ2Q13117 558 aaKnown RBP12.04□□□□□ -0.48
COL5A1-201ENST00000371817 DAZ4Q86SG3 579 aaKnown RBP12.04□□□□□ -0.48
COL5A1-201ENST00000371817 DAZ3Q9NR90 486 aaKnown RBP12.04□□□□□ -0.48
COL5A1-201ENST00000371817 ODF1Q14990 250 aa12.03□□□□□ -0.48
COL5A1-201ENST00000371817 CLPSP04118 112 aa12.03□□□□□ -0.48
COL5A1-201ENST00000371817 BRD3OSQ6XYD6 125 aa12.03□□□□□ -0.48
COL5A1-201ENST00000371817 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
COL5A1-201ENST00000371817 BPY2O14599 106 aa12.03□□□□□ -0.48
COL5A1-201ENST00000371817 C5orf38Q86SI9 138 aa12.02□□□□□ -0.48
COL5A1-201ENST00000371817 IGHV4OR15-8A0A075B7B6 117 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms