RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PCNX2A6NKB5 2137 aa9.96□□□□□ -0.81
GPC4-201ENST00000370828 COX7CP15954 63 aa9.96□□□□□ -0.81
GPC4-201ENST00000370828 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.81
GPC4-201ENST00000370828 PLXNB3Q9ULL4 1909 aa9.96□□□□□ -0.81
GPC4-201ENST00000370828 KIAA1671Q9BY89 1806 aa9.96□□□□□ -0.81
GPC4-201ENST00000370828 I3L3M4 83 aa9.96□□□□□ -0.81
GPC4-201ENST00000370828 AGPAT4-IT1Q9H0P7 198 aa9.96□□□□□ -0.81
GPC4-201ENST00000370828 RPL36AP83881 106 aaKnown RBP9.96□□□□□ -0.82
GPC4-201ENST00000370828 RPL36ALQ969Q0 106 aaKnown RBP9.96□□□□□ -0.82
GPC4-201ENST00000370828 F8WDY8 70 aa9.96□□□□□ -0.82
GPC4-201ENST00000370828 J3QLI3 93 aa9.96□□□□□ -0.82
GPC4-201ENST00000370828 KLK9Q9UKQ9 250 aa9.96□□□□□ -0.82
GPC4-201ENST00000370828 TNCP24821 2201 aa9.96□□□□□ -0.82
GPC4-201ENST00000370828 COL8A2P25067 703 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 XGP55808 180 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 CRIP3Q6Q6R5 217 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 OVOL3O00110 214 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 MRPL36Q9P0J6 103 aaKnown RBP9.95□□□□□ -0.82
GPC4-201ENST00000370828 NOTCH4Q99466 2003 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 E9PLD3 99 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 G3V318 75 aa9.95□□□□□ -0.82
GPC4-201ENST00000370828 LOXP28300 417 aaPredicted RBP9.95□□□□□ -0.82
GPC4-201ENST00000370828 IGHV3-38A0A0C4DH36 116 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 FNDC1Q4ZHG4 1894 aaPredicted RBP9.94□□□□□ -0.82
GPC4-201ENST00000370828 C19orf71A6NCJ1 209 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 LINC00310P59036 64 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 STHQ8IWL8 128 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 TIMM17BO60830 172 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 VSIG2Q96IQ7 327 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 THADAQ6YHU6 1953 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 ATP6V0E1O15342 81 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 BUB3O43684 328 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 GATA4P43694 442 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 SPINK13Q1W4C9 94 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 KRTAP27-1Q3LI81 207 aa9.94□□□□□ -0.82
GPC4-201ENST00000370828 IGHV3-16A0A0C4DH30 117 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 GNRH2O43555 120 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 TCL1BO95988 128 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 ZFP2Q6ZN57 461 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 M0R1W7 72 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 IGKV1-17P01599 117 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 MINOS1Q5TGZ0 78 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 MINOS1-NBL1R4GNA1 71 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 OBSL1O75147 1896 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 TRAV12-2A0A075B6T6 113 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 ZNF883P0CG24 379 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 LINC00311Q8N616 119 aa9.93□□□□□ -0.82
GPC4-201ENST00000370828 RBAKDNA6NC62 111 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 OOSP1A8MZH6 123 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 ELANEP08246 267 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 P0C879 139 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 Q8N1Y9 231 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 SERP2Q8N6R1 65 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 C2orf91Q6ZV80 131 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 PRORYQ9H606 182 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 ICOSQ9Y6W8 199 aa9.92□□□□□ -0.82
GPC4-201ENST00000370828 E7EUB6 86 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 BRD3OSQ6XYD6 125 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 MBD6Q96DN6 1003 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 IGLV3-9A0A075B6K5 115 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 MBD3L4A6NDZ8 208 aaPredicted RBP9.91□□□□□ -0.82
GPC4-201ENST00000370828 MBD3L3A6NE82 208 aaPredicted RBP9.91□□□□□ -0.82
GPC4-201ENST00000370828 MBD3L5A6NJ08 208 aaPredicted RBP9.91□□□□□ -0.82
GPC4-201ENST00000370828 BRWD1-AS2P59051 145 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 SPRNQ5BIV9 151 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 MBD3L2Q8NHZ7 208 aaPredicted RBP9.91□□□□□ -0.82
GPC4-201ENST00000370828 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 A0A1W2PRX2 142 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 IGHG3P01860 377 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 HTN3P15516 51 aa9.91□□□□□ -0.82
GPC4-201ENST00000370828 PMAIP1Q13794 54 aa9.9□□□□□ -0.82
GPC4-201ENST00000370828 SLC25A29Q8N8R3 303 aa9.9□□□□□ -0.82
GPC4-201ENST00000370828 FAM110DQ8TAY7 271 aaPredicted RBP9.9□□□□□ -0.82
GPC4-201ENST00000370828 PRSS22Q9GZN4 317 aa9.9□□□□□ -0.82
GPC4-201ENST00000370828 RITA1Q96K30 269 aa9.9□□□□□ -0.82
GPC4-201ENST00000370828 Q8N976 141 aa9.9□□□□□ -0.82
GPC4-201ENST00000370828 CLEC2BQ92478 149 aa9.9□□□□□ -0.82
GPC4-201ENST00000370828 MLST8Q9BVC4 326 aa9.9□□□□□ -0.82
GPC4-201ENST00000370828 RPL39P62891 51 aaKnown RBP9.9□□□□□ -0.83
GPC4-201ENST00000370828 NDUFA11Q86Y39 141 aa9.9□□□□□ -0.83
GPC4-201ENST00000370828 WFDC9Q8NEX5 89 aa9.9□□□□□ -0.83
GPC4-201ENST00000370828 RNF138Q8WVD3 245 aa9.9□□□□□ -0.83
GPC4-201ENST00000370828 IGFBPL1Q8WX77 278 aa9.9□□□□□ -0.83
GPC4-201ENST00000370828 DAZ1Q9NQZ3 744 aaKnown RBP9.9□□□□□ -0.83
GPC4-201ENST00000370828 UBE2E2Q96LR5 201 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 C11orf86A6NJI1 115 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 NDUFC1O43677 76 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 ATRXP46100 2492 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 INSL3P51460 131 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 HOXD3P31249 432 aaPredicted RBP9.89□□□□□ -0.83
GPC4-201ENST00000370828 NBL1P41271 181 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 TM2D2Q9BX73 214 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 SERP1Q9Y6X1 66 aa9.89□□□□□ -0.83
GPC4-201ENST00000370828 LINC00526Q96FQ7 95 aa9.88□□□□□ -0.83
GPC4-201ENST00000370828 FRMPD3Q5JV73 1810 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms