RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
LMO4-201ENST00000370542 CSMD3Q7Z407 3707 aa11.27□□□□□ -0.61
LMO4-201ENST00000370542 A0A1W2PPM0 123 aa11.27□□□□□ -0.61
LMO4-201ENST00000370542 SMIM13P0DJ93 91 aa11.27□□□□□ -0.61
LMO4-201ENST00000370542 KIR3DS1Q14943 382 aa11.27□□□□□ -0.61
LMO4-201ENST00000370542 MUC7Q8TAX7 377 aa11.27□□□□□ -0.61
LMO4-201ENST00000370542 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.61
LMO4-201ENST00000370542 HIGD1AQ9Y241 93 aa11.27□□□□□ -0.61
LMO4-201ENST00000370542 RYR1P21817 5038 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 A8MZ25 164 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 SLC25A17O43808 307 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 IGLV1-51P01701 117 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 IGHV3-11P01762 117 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 TRGV3P03979 118 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 MYOD1P15172 320 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 SAMD13Q5VXD3 122 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 TMEM116Q8NCL8 245 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 RABAC1Q9UI14 185 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
LMO4-201ENST00000370542 STARD9Q9P2P6 4700 aa11.25□□□□□ -0.61
LMO4-201ENST00000370542 H3BUT2 72 aa11.25□□□□□ -0.61
LMO4-201ENST00000370542 HBDP02042 147 aa11.25□□□□□ -0.61
LMO4-201ENST00000370542 MLANAQ16655 118 aa11.25□□□□□ -0.61
LMO4-201ENST00000370542 Q8N1Y9 231 aa11.25□□□□□ -0.61
LMO4-201ENST00000370542 SRSF8Q9BRL6 282 aaKnown RBP11.25□□□□□ -0.61
LMO4-201ENST00000370542 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
LMO4-201ENST00000370542 SMPXQ9UHP9 88 aa11.25□□□□□ -0.61
LMO4-201ENST00000370542 ORM2P19652 201 aa11.24□□□□□ -0.61
LMO4-201ENST00000370542 MTURNQ8N3F0 131 aa11.24□□□□□ -0.61
LMO4-201ENST00000370542 OR10W1Q8NGF6 305 aa11.24□□□□□ -0.61
LMO4-201ENST00000370542 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
LMO4-201ENST00000370542 A0A1B0GV72 72 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 WT1-ASQ06250 92 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 TAL2Q16559 108 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 ADAMTSL5Q6ZMM2 481 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 LINC00322Q6ZN03 302 aaPredicted RBP11.23□□□□□ -0.61
LMO4-201ENST00000370542 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 SVIPQ8NHG7 77 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 TM2D3Q9BRN9 247 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
LMO4-201ENST00000370542 C19orf73Q9NVV2 129 aa11.23□□□□□ -0.61
LMO4-201ENST00000370542 F8W1H4 67 aa11.22□□□□□ -0.61
LMO4-201ENST00000370542 BMI1P35226 326 aa11.22□□□□□ -0.61
LMO4-201ENST00000370542 ERASQ7Z444 233 aa11.22□□□□□ -0.61
LMO4-201ENST00000370542 SRSF12Q8WXF0 261 aaKnown RBP11.22□□□□□ -0.61
LMO4-201ENST00000370542 USMG5Q96IX5 58 aa11.22□□□□□ -0.61
LMO4-201ENST00000370542 SIGMAR1Q99720 223 aa11.22□□□□□ -0.61
LMO4-201ENST00000370542 LINC01546A6NGU7 62 aa11.21□□□□□ -0.61
LMO4-201ENST00000370542 CNIH1O95406 144 aa11.21□□□□□ -0.61
LMO4-201ENST00000370542 S100A7P31151 101 aa11.21□□□□□ -0.61
LMO4-201ENST00000370542 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.61
LMO4-201ENST00000370542 PRNTQ86SH4 94 aa11.21□□□□□ -0.61
LMO4-201ENST00000370542 IFI27L1Q96BM0 104 aa11.21□□□□□ -0.61
LMO4-201ENST00000370542 PRELID3AQ96N28 172 aa11.21□□□□□ -0.61
LMO4-201ENST00000370542 H0Y8G0 127 aa11.2□□□□□ -0.62
LMO4-201ENST00000370542 ATP5LO75964 103 aa11.2□□□□□ -0.62
LMO4-201ENST00000370542 CSN3P07498 182 aa11.2□□□□□ -0.62
LMO4-201ENST00000370542 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
LMO4-201ENST00000370542 PDE6HQ13956 83 aa11.2□□□□□ -0.62
LMO4-201ENST00000370542 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
LMO4-201ENST00000370542 OR8A1Q8NGG7 326 aa11.2□□□□□ -0.62
LMO4-201ENST00000370542 THYN1Q9P016 225 aa11.2□□□□□ -0.62
LMO4-201ENST00000370542 CGB1A6NKQ9 187 aa11.19□□□□□ -0.62
LMO4-201ENST00000370542 IGLV2-11P01706 119 aa11.19□□□□□ -0.62
LMO4-201ENST00000370542 ARMS2P0C7Q2 107 aa11.19□□□□□ -0.62
LMO4-201ENST00000370542 IGHV4-30-4P0DP06 118 aa11.19□□□□□ -0.62
LMO4-201ENST00000370542 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
LMO4-201ENST00000370542 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
LMO4-201ENST00000370542 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
LMO4-201ENST00000370542 CD300EQ496F6 205 aaPredicted RBP11.18□□□□□ -0.62
LMO4-201ENST00000370542 FOXI2Q6ZQN5 318 aa11.18□□□□□ -0.62
LMO4-201ENST00000370542 GOLT1AQ6ZVE7 132 aa11.18□□□□□ -0.62
LMO4-201ENST00000370542 VGLL1Q99990 258 aa11.18□□□□□ -0.62
LMO4-201ENST00000370542 ZMAT4Q9H898 229 aa11.18□□□□□ -0.62
LMO4-201ENST00000370542 KLK9Q9UKQ9 250 aa11.18□□□□□ -0.62
LMO4-201ENST00000370542 TRBV19A0A075B6N1 114 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 IFI27P40305 119 aaPredicted RBP11.17□□□□□ -0.62
LMO4-201ENST00000370542 ZNF138P52744 262 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 CACNG7P62955 275 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 TTC9CQ8N5M4 171 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 SHANK2-AS3Q9BTD1 123 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 TM2D2Q9BX73 214 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 EDA2RQ9HAV5 297 aa11.17□□□□□ -0.62
LMO4-201ENST00000370542 NXT2Q9NPJ8 142 aaKnown RBP11.17□□□□□ -0.62
LMO4-201ENST00000370542 F11RQ9Y624 299 aaKnown RBP11.17□□□□□ -0.62
LMO4-201ENST00000370542 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 NCR2O95944 276 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 EVI2AP22794 236 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 ZC2HC1AQ96GY0 325 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 MAP1LC3AQ9H492 121 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 AAMDCQ9H7C9 122 aa11.16□□□□□ -0.62
LMO4-201ENST00000370542 PLECQ15149 4684 aaKnown RBP11.15□□□□□ -0.62
LMO4-201ENST00000370542 A0A096LNJ9 63 aa11.15□□□□□ -0.62
LMO4-201ENST00000370542 H3BRN7 92 aa11.15□□□□□ -0.62
LMO4-201ENST00000370542 VCX2Q9H322 139 aa11.15□□□□□ -0.62
LMO4-201ENST00000370542 TP73-AS1Q9UF72 201 aa11.15□□□□□ -0.62
LMO4-201ENST00000370542 D6R8Y8 96 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms