RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 FAM74A4Q5TZK3 123 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 RNASE8Q8TDE3 154 aaKnown RBP8.67□□□□□ -1.02
RAB39B-201ENST00000369454 DPF1Q92782 380 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 MUC4Q99102 2169 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 F5H697 171 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 GCSHP23434 173 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 SYNJ2BPP57105 145 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 SMPXQ9UHP9 88 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 CRIP2P52943 208 aaPredicted RBP8.67□□□□□ -1.02
RAB39B-201ENST00000369454 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
RAB39B-201ENST00000369454 BEX4Q9NWD9 120 aaPredicted RBP8.67□□□□□ -1.02
RAB39B-201ENST00000369454 IGLV1-40P01703 118 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 CD7P09564 240 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 ACANP16112 2415 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 PRRC2AP48634 2157 aaKnown RBP8.66□□□□□ -1.02
RAB39B-201ENST00000369454 ZNF469Q96JG9 3925 aaPredicted RBP8.66□□□□□ -1.02
RAB39B-201ENST00000369454 H3BUT2 72 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 RASL10AQ92737 203 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 AP1S3Q96PC3 154 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 HHLA3Q9XRX5 114 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 MTORP42345 2549 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.02
RAB39B-201ENST00000369454 DEFB136Q30KP8 78 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 FAM159AQ6UWV7 190 aa8.66□□□□□ -1.02
RAB39B-201ENST00000369454 DPM2O94777 84 aa8.65□□□□□ -1.02
RAB39B-201ENST00000369454 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.02
RAB39B-201ENST00000369454 EMP1P54849 157 aa8.65□□□□□ -1.02
RAB39B-201ENST00000369454 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.02
RAB39B-201ENST00000369454 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.02
RAB39B-201ENST00000369454 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.02
RAB39B-201ENST00000369454 CHD6Q8TD26 2715 aa8.65□□□□□ -1.02
RAB39B-201ENST00000369454 KRTAP10-9P60411 292 aa8.65□□□□□ -1.02
RAB39B-201ENST00000369454 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
RAB39B-201ENST00000369454 SCGB3A1Q96QR1 104 aa8.64□□□□□ -1.03
RAB39B-201ENST00000369454 DPH3P1Q9H4G8 78 aa8.64□□□□□ -1.03
RAB39B-201ENST00000369454 KHDC1LQ5JSQ8 128 aa8.64□□□□□ -1.03
RAB39B-201ENST00000369454 BBC3Q96PG8 261 aaPredicted RBP8.64□□□□□ -1.03
RAB39B-201ENST00000369454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
RAB39B-201ENST00000369454 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
RAB39B-201ENST00000369454 NBPF19A0A087WUL8 3843 aa8.64□□□□□ -1.03
RAB39B-201ENST00000369454 K7ERJ3 54 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 ATP5LO75964 103 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 LINC01356Q8N9X3 169 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 H3BUA1 57 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 PSMB8P28062 276 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 DCANP1Q8TF63 244 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 CSTL1Q9H114 145 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 LENEPQ9Y5L5 61 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 ID1P41134 155 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 ADAMTSL5Q6ZMM2 481 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 C18orf65Q6ZTR6 163 aa8.63□□□□□ -1.03
RAB39B-201ENST00000369454 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 JMJD1CQ15652 2540 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 C2CD3Q4AC94 2353 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 NIPBLQ6KC79 2804 aaeCLIP8.62□□□□□ -1.03
RAB39B-201ENST00000369454 COX6B1P14854 86 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 FXYD2P54710 66 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 CFHR3Q02985 330 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 HSD52Q0P140 79 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 MAPKAPK5-AS1Q8N8E1 139 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 OR9G4Q8NGQ1 327 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 MRAP2Q96G30 205 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 MDFICQ9P1T7 246 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 NACAE9PAV3 2078 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 IGHV4-4A0A075B6R2 117 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 IGHV4OR15-8A0A075B7B6 117 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 A0A087WW49 117 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 A6NDN8 102 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 GAGE10A6NGK3 116 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 HOXA3O43365 443 aaPredicted RBP8.62□□□□□ -1.03
RAB39B-201ENST00000369454 PRM2P04554 102 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 SEC11AP67812 179 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 C2orf66Q6UXQ4 117 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 JMJD8Q96S16 334 aa8.62□□□□□ -1.03
RAB39B-201ENST00000369454 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
RAB39B-201ENST00000369454 CHAC1Q9BUX1 264 aa8.61□□□□□ -1.03
RAB39B-201ENST00000369454 APCP25054 2843 aa8.61□□□□□ -1.03
RAB39B-201ENST00000369454 ZNF256Q9Y2P7 627 aaPredicted RBP8.61□□□□□ -1.03
RAB39B-201ENST00000369454 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
RAB39B-201ENST00000369454 C11orf44Q8N8P7 122 aa8.6□□□□□ -1.03
RAB39B-201ENST00000369454 NHP2Q9NX24 153 aaKnown RBP8.6□□□□□ -1.03
RAB39B-201ENST00000369454 A0A087WX48 190 aa8.6□□□□□ -1.03
RAB39B-201ENST00000369454 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
RAB39B-201ENST00000369454 DUSP14O95147 198 aaKnown RBP8.6□□□□□ -1.03
RAB39B-201ENST00000369454 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
RAB39B-201ENST00000369454 CHTOPQ9Y3Y2 248 aaKnown RBP8.6□□□□□ -1.03
RAB39B-201ENST00000369454 ITPR3Q14573 2671 aa8.6□□□□□ -1.03
RAB39B-201ENST00000369454 GAGE12BA1L429 117 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 HOXD3P31249 432 aaPredicted RBP8.59□□□□□ -1.03
RAB39B-201ENST00000369454 SNRPD3P62318 126 aaKnown RBP8.59□□□□□ -1.03
RAB39B-201ENST00000369454 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 IGHV3-73A0A0B4J1V6 119 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 SLC25A16P16260 332 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 ZNF56Q15929 161 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 ORMDL2Q53FV1 153 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 FAM19A4Q96LR4 140 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 SLURP1P55000 103 aa8.59□□□□□ -1.03
RAB39B-201ENST00000369454 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
RAB39B-201ENST00000369454 Q8N1Y9 231 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms