RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 PRM2P04554 102 aa10.38□□□□□ -0.75
HMGCS2-201ENST00000369406 TMEM256Q8N2U0 113 aa10.38□□□□□ -0.75
HMGCS2-201ENST00000369406 SNHG12Q9BXW3 62 aa10.38□□□□□ -0.75
HMGCS2-201ENST00000369406 C19orf73Q9NVV2 129 aa10.38□□□□□ -0.75
HMGCS2-201ENST00000369406 NTF3P20783 257 aa10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 SRIP30626 198 aa10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 LEPP41159 167 aa10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 JOSD1Q15040 202 aaPredicted RBP10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 TIMM8BQ9Y5J9 83 aaPredicted RBP10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 CDKN1BP46527 198 aa10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 GATD1Q8NB37 220 aa10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 CNFNQ9BYD5 112 aa10.37□□□□□ -0.75
HMGCS2-201ENST00000369406 RNASE3P12724 160 aaKnown RBP10.36□□□□□ -0.75
HMGCS2-201ENST00000369406 IQCJQ1A5X6 159 aa10.36□□□□□ -0.75
HMGCS2-201ENST00000369406 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
HMGCS2-201ENST00000369406 RIGQ13278 110 aa10.36□□□□□ -0.75
HMGCS2-201ENST00000369406 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 SNAI2O43623 268 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 TWIST1Q15672 202 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 COX19Q49B96 90 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 COA6Q5JTJ3 125 aaKnown RBP10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 RCHY1Q96PM5 261 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 AMN1Q8IY45 258 aa10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 ALKBH7Q9BT30 221 aaPredicted RBP10.35□□□□□ -0.75
HMGCS2-201ENST00000369406 LOC102724200A0A096LPH7 203 aaPredicted RBP10.34□□□□□ -0.75
HMGCS2-201ENST00000369406 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
HMGCS2-201ENST00000369406 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
HMGCS2-201ENST00000369406 NPSP0C0P6 89 aa10.34□□□□□ -0.75
HMGCS2-201ENST00000369406 ZNF493Q6ZR52 646 aa10.34□□□□□ -0.75
HMGCS2-201ENST00000369406 DLEU1O43261 78 aa10.34□□□□□ -0.75
HMGCS2-201ENST00000369406 TMEM208Q9BTX3 173 aa10.34□□□□□ -0.75
HMGCS2-201ENST00000369406 AMBPP02760 352 aa10.33□□□□□ -0.76
HMGCS2-201ENST00000369406 OR5AL1P0C617 328 aa10.33□□□□□ -0.76
HMGCS2-201ENST00000369406 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
HMGCS2-201ENST00000369406 C18orf32Q8TCD1 76 aa10.33□□□□□ -0.76
HMGCS2-201ENST00000369406 SCRT2Q9NQ03 307 aa10.33□□□□□ -0.76
HMGCS2-201ENST00000369406 MDFICQ9P1T7 246 aa10.33□□□□□ -0.76
HMGCS2-201ENST00000369406 RNF185Q96GF1 192 aa10.33□□□□□ -0.76
HMGCS2-201ENST00000369406 SMKR1H3BMG3 65 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 M0R143 59 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 SERF1AO75920 110 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 ASIPP42127 132 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 Q8N1Y9 231 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 URB1-AS1Q96HZ7 61 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 EVI2AP22794 236 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 TSPOP30536 169 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 BORCS7Q96B45 105 aa10.32□□□□□ -0.76
HMGCS2-201ENST00000369406 IGHV3-16A0A0C4DH30 117 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 FAM159AQ6UWV7 190 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 OR2K2Q8NGT1 345 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 A0A1B0GW15 77 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 M0R381 172 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 Q0VG73 95 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 MRPL51Q4U2R6 128 aaKnown RBP10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 XCL2Q9UBD3 114 aa10.31□□□□□ -0.76
HMGCS2-201ENST00000369406 IGHV4-4A0A075B6R2 117 aa10.3□□□□□ -0.76
HMGCS2-201ENST00000369406 NCR2O95944 276 aa10.3□□□□□ -0.76
HMGCS2-201ENST00000369406 IGLL1P15814 213 aa10.3□□□□□ -0.76
HMGCS2-201ENST00000369406 DMRTA1Q5VZB9 504 aa10.3□□□□□ -0.76
HMGCS2-201ENST00000369406 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
HMGCS2-201ENST00000369406 STHQ8IWL8 128 aa10.29□□□□□ -0.76
HMGCS2-201ENST00000369406 DEFB125Q8N687 156 aa10.29□□□□□ -0.76
HMGCS2-201ENST00000369406 TMEM191AQ9H0A3 160 aa10.29□□□□□ -0.76
HMGCS2-201ENST00000369406 JPT2Q9H910 190 aa10.29□□□□□ -0.76
HMGCS2-201ENST00000369406 D6R8Y8 96 aa10.29□□□□□ -0.76
HMGCS2-201ENST00000369406 GATA1P15976 413 aaPredicted RBP10.29□□□□□ -0.76
HMGCS2-201ENST00000369406 LINC00614P0C842 121 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 HTN1P15515 57 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 GAGE1Q13065 139 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 C9orf85Q96MD7 179 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 ZNF747Q9BV97 191 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 BAGE3Q86Y29 109 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 C1orf158Q8N1D5 194 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 U3KQK5 164 aa10.28□□□□□ -0.76
HMGCS2-201ENST00000369406 TRAV26-2A0A0B4J265 109 aa10.27□□□□□ -0.76
HMGCS2-201ENST00000369406 NXPH4O95158 308 aa10.27□□□□□ -0.76
HMGCS2-201ENST00000369406 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.76
HMGCS2-201ENST00000369406 KCNS1Q96KK3 526 aa10.27□□□□□ -0.76
HMGCS2-201ENST00000369406 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.76
HMGCS2-201ENST00000369406 MED14OSP0DP75 135 aa10.27□□□□□ -0.77
HMGCS2-201ENST00000369406 COTL1Q14019 142 aa10.27□□□□□ -0.77
HMGCS2-201ENST00000369406 C9orf66Q5T8R8 295 aa10.27□□□□□ -0.77
HMGCS2-201ENST00000369406 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
HMGCS2-201ENST00000369406 NOTCH1P46531 2555 aa10.27□□□□□ -0.77
HMGCS2-201ENST00000369406 CACNG7P62955 275 aa10.26□□□□□ -0.77
HMGCS2-201ENST00000369406 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
HMGCS2-201ENST00000369406 NPYP01303 97 aa10.26□□□□□ -0.77
HMGCS2-201ENST00000369406 AZU1P20160 251 aa10.26□□□□□ -0.77
HMGCS2-201ENST00000369406 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms