RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 CYSLTR1Q9Y271 337 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 CFAP126Q5VTH2 177 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 PGPEP1Q9NXJ5 209 aa9.54□□□□□ -0.88
SHC1-203ENST00000368449 A0A087WX48 190 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 NPFFO15130 113 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 TAL2Q16559 108 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 ITLN2Q8WWU7 325 aaPredicted RBP9.53□□□□□ -0.88
SHC1-203ENST00000368449 MRPL53Q96EL3 112 aaKnown RBP9.53□□□□□ -0.88
SHC1-203ENST00000368449 M0R381 172 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 KLRB1Q12918 225 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 Q6ZUT4 128 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 ZFAND2AQ8N6M9 145 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 RPL39LQ96EH5 51 aaKnown RBP9.53□□□□□ -0.88
SHC1-203ENST00000368449 RASL10AQ92737 203 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 SMIM2Q9BVW6 85 aa9.53□□□□□ -0.88
SHC1-203ENST00000368449 TSPAN13O95857 204 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 HLA-DRB4P13762 266 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 ZFP2Q6ZN57 461 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 HLA-DRB4X5D2U9 266 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 TRAV41A0A0B4J266 112 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 F6UB75 175 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 HOXA3O43365 443 aaPredicted RBP9.52□□□□□ -0.89
SHC1-203ENST00000368449 C19orf54Q5BKX5 351 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 C14orf178Q8N769 122 aaPredicted RBP9.52□□□□□ -0.89
SHC1-203ENST00000368449 SS18L2Q9UHA2 77 aa9.52□□□□□ -0.89
SHC1-203ENST00000368449 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
SHC1-203ENST00000368449 BRD3OSQ6XYD6 125 aa9.51□□□□□ -0.89
SHC1-203ENST00000368449 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 ARL3P36405 182 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 PSMB2P49721 201 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 CARD19Q96LW7 228 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 DEFB104AQ8WTQ1 72 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 SPG11Q96JI7 2443 aa9.5□□□□□ -0.89
SHC1-203ENST00000368449 SOCS3O14543 225 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 GNRH2O43555 120 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 SUMO2P61956 95 aaKnown RBP9.49□□□□□ -0.89
SHC1-203ENST00000368449 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 C9orf139Q6ZV77 190 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 DLX4Q92988 240 aaPredicted RBP9.49□□□□□ -0.89
SHC1-203ENST00000368449 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 MYMXA0A1B0GTQ4 84 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 PIEZO1Q92508 2521 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 MUC4Q99102 2169 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 OR11H12B2RN74 326 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 F8VRH5 84 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 OR11H1Q8NG94 326 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 OR11H2Q8NH07 326 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 ATP6V0E2Q8NHE4 81 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
SHC1-203ENST00000368449 H7C1H1 209 aa9.48□□□□□ -0.89
SHC1-203ENST00000368449 LGALS1P09382 135 aaKnown RBP9.48□□□□□ -0.89
SHC1-203ENST00000368449 PLNP26678 52 aa9.48□□□□□ -0.89
SHC1-203ENST00000368449 RNASE4P34096 147 aaKnown RBP9.48□□□□□ -0.89
SHC1-203ENST00000368449 NEXN-AS1Q8NBZ9 246 aa9.48□□□□□ -0.89
SHC1-203ENST00000368449 S100A4P26447 101 aaKnown RBP9.48□□□□□ -0.89
SHC1-203ENST00000368449 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
SHC1-203ENST00000368449 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
SHC1-203ENST00000368449 MOB4Q9Y3A3 225 aa9.48□□□□□ -0.89
SHC1-203ENST00000368449 CELSR2Q9HCU4 2923 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 C19orf84I3L1E1 186 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 MGPP08493 103 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 Q6ZS46 218 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 LINC00477Q96M19 166 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 ITPR1Q14643 2758 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 TRAV12-1A0A0B4J245 112 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 TGFAP01135 160 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 RNASE3P12724 160 aaKnown RBP9.47□□□□□ -0.89
SHC1-203ENST00000368449 EDN2P20800 178 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 PHLDA3Q9Y5J5 127 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 LENEPQ9Y5L5 61 aa9.47□□□□□ -0.89
SHC1-203ENST00000368449 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■■□ 25.8
SHC1-203ENST00000368449 TRAV21A0A0B4J279 112 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 FAM223BA6NKX1 122 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.89
SHC1-203ENST00000368449 LY6EQ16553 131 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 FAM223AQ8IWN6 122 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 PLEKHB2Q96CS7 222 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 ANAPC13Q9BS18 74 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 DPH3P1Q9H4G8 78 aa9.46□□□□□ -0.89
SHC1-203ENST00000368449 SRD5A1P18405 259 aa9.46□□□□□ -0.9
SHC1-203ENST00000368449 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.9
SHC1-203ENST00000368449 BAALCQ8WXS3 180 aa9.46□□□□□ -0.9
SHC1-203ENST00000368449 ASIPP42127 132 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 ORMDL2Q53FV1 153 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 FAM19A4Q96LR4 140 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 JPT2Q9H910 190 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 CRYBG3Q68DQ2 2970 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 B5MCH6 92 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 IGHV4-39P01824 125 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 LY6DQ14210 128 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 TEN1Q86WV5 123 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
SHC1-203ENST00000368449 CSPG4Q6UVK1 2322 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms