RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 TMEM158Q8WZ71 300 aa10.4□□□□□ -0.74
SHC1-202ENST00000368445 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
SHC1-202ENST00000368445 GCN1Q92616 2671 aaKnown RBP10.39□□□□□ -0.75
SHC1-202ENST00000368445 SOCS3O14543 225 aa10.39□□□□□ -0.75
SHC1-202ENST00000368445 NMUP48645 174 aa10.39□□□□□ -0.75
SHC1-202ENST00000368445 LRRC75A-AS1Q8N1F1 130 aa10.39□□□□□ -0.75
SHC1-202ENST00000368445 OR1N2Q8NGR9 330 aa10.39□□□□□ -0.75
SHC1-202ENST00000368445 JPT2Q9H910 190 aa10.39□□□□□ -0.75
SHC1-202ENST00000368445 LAMTOR2Q9Y2Q5 125 aa10.39□□□□□ -0.75
SHC1-202ENST00000368445 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 NEGR1Q7Z3B1 354 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 DCANP1Q8TF63 244 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 NXT2Q9NPJ8 142 aaKnown RBP10.38□□□□□ -0.75
SHC1-202ENST00000368445 LENEPQ9Y5L5 61 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 ZNF124Q15973 351 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 SLC25A34Q6PIV7 304 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 CR1P17927 2039 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 C7orf71A4D174 169 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 TSPOP30536 169 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 MYOZ3Q8TDC0 251 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 FOXC2Q99958 501 aa10.38□□□□□ -0.75
SHC1-202ENST00000368445 ZNF25P17030 456 aaPredicted RBP10.37□□□□□ -0.75
SHC1-202ENST00000368445 LINC01619G3V211 115 aa10.37□□□□□ -0.75
SHC1-202ENST00000368445 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
SHC1-202ENST00000368445 AP1S3Q96PC3 154 aa10.37□□□□□ -0.75
SHC1-202ENST00000368445 CBY3A6NI87 242 aa10.37□□□□□ -0.75
SHC1-202ENST00000368445 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
SHC1-202ENST00000368445 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
SHC1-202ENST00000368445 C2orf88Q9BSF0 95 aa10.36□□□□□ -0.75
SHC1-202ENST00000368445 DPH3P1Q9H4G8 78 aa10.36□□□□□ -0.75
SHC1-202ENST00000368445 TMEM160Q9NX00 188 aa10.36□□□□□ -0.75
SHC1-202ENST00000368445 DNAJC9-AS1A6NH13 148 aa10.36□□□□□ -0.75
SHC1-202ENST00000368445 LBHQ53QV2 105 aaPredicted RBP10.36□□□□□ -0.75
SHC1-202ENST00000368445 PSMG3-AS1Q96PY0 264 aa10.36□□□□□ -0.75
SHC1-202ENST00000368445 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
SHC1-202ENST00000368445 NBPF19A0A087WUL8 3843 aa10.36□□□□□ -0.75
SHC1-202ENST00000368445 BRI3O95415 125 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 SRSF2Q01130 221 aaKnown RBP10.35□□□□□ -0.75
SHC1-202ENST00000368445 ZNF56Q15929 161 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 ERASQ7Z444 233 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 DLX4Q92988 240 aaPredicted RBP10.35□□□□□ -0.75
SHC1-202ENST00000368445 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 PLA2G2AP14555 144 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 APRG1Q8IVJ8 170 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 PRM2P04554 102 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 CDKN1BP46527 198 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 MDFICQ9P1T7 246 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 U3KQK5 164 aa10.35□□□□□ -0.75
SHC1-202ENST00000368445 COL5A1-AS1Q5SY13 56 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 SAMD13Q5VXD3 122 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 Q6ZSV7 163 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 ZNF256Q9Y2P7 627 aaPredicted RBP10.34□□□□□ -0.75
SHC1-202ENST00000368445 LAGE3Q14657 143 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 CNFNQ9BYD5 112 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 A0A096LNJ9 63 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 A0A0J9YX75 114 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 TMEM89A2RUT3 159 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 K7EQG2 157 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 GATD1Q8NB37 220 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 SMR3AQ99954 134 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 ST20Q9HBF5 79 aa10.34□□□□□ -0.75
SHC1-202ENST00000368445 FCER1GP30273 86 aa10.33□□□□□ -0.76
SHC1-202ENST00000368445 NUTF2P61970 127 aaKnown RBP10.33□□□□□ -0.76
SHC1-202ENST00000368445 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
SHC1-202ENST00000368445 Q6ZVH6 145 aa10.33□□□□□ -0.76
SHC1-202ENST00000368445 Q8N8P6 123 aa10.33□□□□□ -0.76
SHC1-202ENST00000368445 OR9G4Q8NGQ1 327 aa10.33□□□□□ -0.76
SHC1-202ENST00000368445 Q8N1Y9 231 aa10.32□□□□□ -0.76
SHC1-202ENST00000368445 DUSP14O95147 198 aaKnown RBP10.32□□□□□ -0.76
SHC1-202ENST00000368445 FSHBP01225 129 aa10.32□□□□□ -0.76
SHC1-202ENST00000368445 RNASE3P12724 160 aaKnown RBP10.32□□□□□ -0.76
SHC1-202ENST00000368445 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
SHC1-202ENST00000368445 LINC01545Q5VT33 79 aa10.32□□□□□ -0.76
SHC1-202ENST00000368445 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
SHC1-202ENST00000368445 NSUN5P1Q3KNT7 163 aa10.32□□□□□ -0.76
SHC1-202ENST00000368445 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
SHC1-202ENST00000368445 SETXQ7Z333 2677 aaKnown RBP10.31□□□□□ -0.76
SHC1-202ENST00000368445 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
SHC1-202ENST00000368445 KRTAP1-3Q8IUG1 177 aa10.31□□□□□ -0.76
SHC1-202ENST00000368445 CRXO43186 299 aaPredicted RBP10.31□□□□□ -0.76
SHC1-202ENST00000368445 CD5LO43866 347 aa10.31□□□□□ -0.76
SHC1-202ENST00000368445 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
SHC1-202ENST00000368445 TEX29Q8N6K0 151 aa10.31□□□□□ -0.76
SHC1-202ENST00000368445 LINC01587Q99440 93 aa10.31□□□□□ -0.76
SHC1-202ENST00000368445 IGHV1OR15-1A0A075B7D0 117 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 CD28P10747 220 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 CD300EQ496F6 205 aaPredicted RBP10.3□□□□□ -0.76
SHC1-202ENST00000368445 SYT8Q8NBV8 401 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 ZNF580Q9UK33 172 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 GTSCR1Q86UQ5 136 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
SHC1-202ENST00000368445 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 ZNF469Q96JG9 3925 aaPredicted RBP10.3□□□□□ -0.76
SHC1-202ENST00000368445 NIPBLQ6KC79 2804 aaeCLIP10.3□□□□□ -0.76
SHC1-202ENST00000368445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
SHC1-202ENST00000368445 LURAP1LQ8IV03 231 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 ESM1Q9NQ30 184 aa10.3□□□□□ -0.76
SHC1-202ENST00000368445 XCL2Q9UBD3 114 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms