RNA–Protein interactions for RNA: ENST00000367576.5

LTV1-201, Transcript of LTV1 ribosome biogenesis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTV1, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTV1-201ENST00000367576 LINC00467Q9BRT7 94 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 TRAPPC1Q9Y5R8 145 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 KIR2DL5BA0A0G2JN68 375 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 KIR2DL5BA0A0G2JPC4 375 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 MED14OSP0DP75 135 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 ZNF415Q09FC8 603 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 FABP9Q0Z7S8 132 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 KIR2DL5AQ8N109 375 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 KIR2DL5BQ8NHK3 375 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 SCRT2Q9NQ03 307 aa12.88□□□□□ -0.35
LTV1-201ENST00000367576 CNFNQ9BYD5 112 aa12.87□□□□□ -0.35
LTV1-201ENST00000367576 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
LTV1-201ENST00000367576 CACNG7P62955 275 aa12.86□□□□□ -0.35
LTV1-201ENST00000367576 WDR73Q6P4I2 378 aa12.86□□□□□ -0.35
LTV1-201ENST00000367576 ZNF705AQ6ZN79 300 aaPredicted RBP12.86□□□□□ -0.35
LTV1-201ENST00000367576 ZFP82Q8N141 532 aa12.86□□□□□ -0.35
LTV1-201ENST00000367576 GNB1LQ9BYB4 327 aa12.86□□□□□ -0.35
LTV1-201ENST00000367576 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
LTV1-201ENST00000367576 C11orf72Q8NBR9 251 aa12.85□□□□□ -0.35
LTV1-201ENST00000367576 SLAQ13239 276 aa12.85□□□□□ -0.35
LTV1-201ENST00000367576 KIAA1644Q3SXP7 199 aa12.85□□□□□ -0.35
LTV1-201ENST00000367576 RASL11AQ6T310 242 aa12.85□□□□□ -0.35
LTV1-201ENST00000367576 RCHY1Q96PM5 261 aa12.85□□□□□ -0.35
LTV1-201ENST00000367576 A0A1B0GW15 77 aa12.84□□□□□ -0.35
LTV1-201ENST00000367576 HLA-DQA1P01909 254 aa12.84□□□□□ -0.35
LTV1-201ENST00000367576 KRTAP21-3Q3LHN1 58 aa12.84□□□□□ -0.35
LTV1-201ENST00000367576 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
LTV1-201ENST00000367576 CMYA5Q8N3K9 4069 aa12.84□□□□□ -0.35
LTV1-201ENST00000367576 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.35
LTV1-201ENST00000367576 S100A8P05109 93 aa12.83□□□□□ -0.35
LTV1-201ENST00000367576 RRN3P1Q2M238 152 aa12.83□□□□□ -0.35
LTV1-201ENST00000367576 COX19Q49B96 90 aa12.83□□□□□ -0.35
LTV1-201ENST00000367576 KPRPQ5T749 579 aaPredicted RBP12.83□□□□□ -0.35
LTV1-201ENST00000367576 JPT2Q9H910 190 aa12.83□□□□□ -0.35
LTV1-201ENST00000367576 MRPL16Q9NX20 251 aaKnown RBP12.83□□□□□ -0.35
LTV1-201ENST00000367576 IGHV4-4A0A075B6R2 117 aa12.83□□□□□ -0.36
LTV1-201ENST00000367576 K7EIL1 84 aa12.83□□□□□ -0.36
LTV1-201ENST00000367576 APCSP02743 223 aa12.83□□□□□ -0.36
LTV1-201ENST00000367576 MT-ND6P03923 174 aa12.83□□□□□ -0.36
LTV1-201ENST00000367576 EVI2AP22794 236 aa12.83□□□□□ -0.36
LTV1-201ENST00000367576 AMN1Q8IY45 258 aa12.83□□□□□ -0.36
LTV1-201ENST00000367576 TMEM263Q8WUH6 116 aaKnown RBP12.83□□□□□ -0.36
LTV1-201ENST00000367576 NXPH4O95158 308 aa12.82□□□□□ -0.36
LTV1-201ENST00000367576 RETNQ9HD89 108 aa12.82□□□□□ -0.36
LTV1-201ENST00000367576 X6R8D5 127 aa12.82□□□□□ -0.36
LTV1-201ENST00000367576 A8MZ25 164 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 EMP1P54849 157 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 ZNF876PQ49A33 203 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
LTV1-201ENST00000367576 SYT8Q8NBV8 401 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 MUC4Q99102 2169 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 UBE2CO00762 179 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 PHOX2AO14813 284 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 C16orf74Q96GX8 76 aa12.81□□□□□ -0.36
LTV1-201ENST00000367576 ZNF493Q6ZR52 646 aa12.8□□□□□ -0.36
LTV1-201ENST00000367576 OR11H2Q8NH07 326 aa12.8□□□□□ -0.36
LTV1-201ENST00000367576 IL17DQ8TAD2 202 aa12.8□□□□□ -0.36
LTV1-201ENST00000367576 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
LTV1-201ENST00000367576 TMEM191AQ9H0A3 160 aa12.8□□□□□ -0.36
LTV1-201ENST00000367576 NOTCH1P46531 2555 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 A0A087WWL8 130 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 PLAC8L1A1L4L8 177 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 M0R2P5 195 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 TRGC1P0CF51 173 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 DEFB121Q5J5C9 76 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 SMIM15Q7Z3B0 74 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
LTV1-201ENST00000367576 MGAM2Q2M2H8 2515 aa12.79□□□□□ -0.36
LTV1-201ENST00000367576 MGPP08493 103 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 RAB5BP61020 215 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 FAM104BQ5XKR9 115 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 SPXQ9BT56 116 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 TRGV1A0A0A0MS02 117 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 SMKR1H3BMG3 65 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 DEFB4AO15263 64 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 FAM74A4Q5TZK3 123 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 RNF183Q96D59 192 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 SAMD10Q9BYL1 202 aa12.78□□□□□ -0.36
LTV1-201ENST00000367576 NCR2O95944 276 aa12.77□□□□□ -0.37
LTV1-201ENST00000367576 MRPL51Q4U2R6 128 aaKnown RBP12.77□□□□□ -0.37
LTV1-201ENST00000367576 Q6ZWC4 215 aa12.77□□□□□ -0.37
LTV1-201ENST00000367576 RNF185Q96GF1 192 aa12.77□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BKO60814 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BJP06899 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BOP23527 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 SRIP30626 198 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BBP33778 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BDP58876 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BCP62807 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST2H2BEQ16778 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.76□□□□□ -0.37
LTV1-201ENST00000367576 Q6ZTI0 123 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BHQ93079 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BNQ99877 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 HIST1H2BMQ99879 126 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 IGHV4-28A0A0C4DH34 117 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 RAB4AP20338 218 aa12.76□□□□□ -0.37
LTV1-201ENST00000367576 DPH3P1Q9H4G8 78 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms