RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CCL19Q99731 98 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 CSTL1Q9H114 145 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 VPS13CQ709C8 3753 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 ATP5J2P56134 94 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 OR5A1Q8NGJ0 315 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 JPT2Q9H910 190 aa9.34□□□□□ -0.91
PTPN7-202ENST00000367279 F8VRH5 84 aa9.33□□□□□ -0.92
PTPN7-202ENST00000367279 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
PTPN7-202ENST00000367279 SCGB1D4Q6XE38 83 aa9.33□□□□□ -0.92
PTPN7-202ENST00000367279 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
PTPN7-202ENST00000367279 TRAV12-3A0A0B4J271 114 aa9.33□□□□□ -0.92
PTPN7-202ENST00000367279 FAM159AQ6UWV7 190 aa9.33□□□□□ -0.92
PTPN7-202ENST00000367279 CD7P09564 240 aa9.32□□□□□ -0.92
PTPN7-202ENST00000367279 CD300EQ496F6 205 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-202ENST00000367279 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
PTPN7-202ENST00000367279 CLEC2AQ6UVW9 174 aa9.32□□□□□ -0.92
PTPN7-202ENST00000367279 AMTNQ6UX39 209 aa9.32□□□□□ -0.92
PTPN7-202ENST00000367279 ZNF479Q96JC4 524 aa9.32□□□□□ -0.92
PTPN7-202ENST00000367279 IGHV4-4A0A075B6R2 117 aa9.31□□□□□ -0.92
PTPN7-202ENST00000367279 ZNF688P0C7X2 276 aa9.31□□□□□ -0.92
PTPN7-202ENST00000367279 HLA-DRB4P13762 266 aa9.31□□□□□ -0.92
PTPN7-202ENST00000367279 LENEPQ9Y5L5 61 aa9.31□□□□□ -0.92
PTPN7-202ENST00000367279 HLA-DRB4X5D2U9 266 aa9.31□□□□□ -0.92
PTPN7-202ENST00000367279 IGHV4-30-2A0A087WSY4 118 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
PTPN7-202ENST00000367279 C12orf74Q32Q52 190 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 PRSS29PA6NIE9 313 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
PTPN7-202ENST00000367279 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 USMG5Q96IX5 58 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 USP9YO00507 2555 aaPredicted RBP9.3□□□□□ -0.92
PTPN7-202ENST00000367279 MUC4Q99102 2169 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 H3BMG7 143 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 RNASE3P12724 160 aaKnown RBP9.3□□□□□ -0.92
PTPN7-202ENST00000367279 HTN1P15515 57 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 TOMM6Q96B49 74 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 PRADC1Q9BSG0 188 aa9.3□□□□□ -0.92
PTPN7-202ENST00000367279 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
PTPN7-202ENST00000367279 ZNF256Q9Y2P7 627 aaPredicted RBP9.3□□□□□ -0.92
PTPN7-202ENST00000367279 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 IGLL5B9A064 214 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 TEX48A0A1B0GUV7 120 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 SOCS3O14543 225 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 IGHG2P01859 326 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 SLC25A16P16260 332 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 KLK9Q2XQG4 91 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 KLHL30-AS1Q8NEE0 82 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 NRGNQ92686 78 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 C20orf78Q9BR46 151 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 KLK9Q9UKQ9 250 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 TP53TG1Q9Y2A0 90 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 G3V4G9 280 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
PTPN7-202ENST00000367279 C19orf54Q5BKX5 351 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 C10orf99Q6UWK7 81 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 DUX5Q96PT3 197 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 TM2D2Q9BX73 214 aa9.29□□□□□ -0.92
PTPN7-202ENST00000367279 NEXN-AS1Q8NBZ9 246 aa9.28□□□□□ -0.92
PTPN7-202ENST00000367279 POLQO75417 2590 aa9.28□□□□□ -0.92
PTPN7-202ENST00000367279 PRSS47A8MTI9 375 aa9.28□□□□□ -0.92
PTPN7-202ENST00000367279 ID1P41134 155 aa9.28□□□□□ -0.92
PTPN7-202ENST00000367279 WFDC2Q14508 124 aa9.27□□□□□ -0.92
PTPN7-202ENST00000367279 ZNF56Q15929 161 aa9.27□□□□□ -0.92
PTPN7-202ENST00000367279 CRYBG3Q68DQ2 2970 aa9.27□□□□□ -0.92
PTPN7-202ENST00000367279 MAPK1IP1LQ8NDC0 245 aa9.27□□□□□ -0.92
PTPN7-202ENST00000367279 FAM208BQ5VWN6 2430 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 PKD1L2Q7Z442 2459 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 C10orf105Q8TEF2 133 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 PHLDA1Q8WV24 401 aaPredicted RBP9.27□□□□□ -0.93
PTPN7-202ENST00000367279 CENPEQ02224 2701 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 TRAV12-1A0A0B4J245 112 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 A6NDX4 124 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 APOMO95445 188 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 MSMBP08118 114 aa9.27□□□□□ -0.93
PTPN7-202ENST00000367279 LGALS1P09382 135 aaKnown RBP9.26□□□□□ -0.93
PTPN7-202ENST00000367279 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 PLEKHB2Q96CS7 222 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 LOC107984156A0A0G2JMH3 177 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 AVPP01185 164 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 SH2D6Q7Z4S9 175 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 ARL17AQ8IVW1 177 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 MRPL16Q9NX20 251 aaKnown RBP9.26□□□□□ -0.93
PTPN7-202ENST00000367279 CELSR2Q9HCU4 2923 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 CACNA1AO00555 2505 aa9.26□□□□□ -0.93
PTPN7-202ENST00000367279 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 HOXA3O43365 443 aaPredicted RBP9.25□□□□□ -0.93
PTPN7-202ENST00000367279 ETDBQ3ZM63 59 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 ACACBO00763 2458 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 E9PLD3 99 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 IGHV4-59P01825 116 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 SPINK13Q1W4C9 94 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 FOXI2Q6ZQN5 318 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 ATP6V0BQ99437 205 aa9.25□□□□□ -0.93
PTPN7-202ENST00000367279 UTP20O75691 2785 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms