RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 H3BT86 120 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 BPESC1Q9GZL8 116 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 PLA2G2EQ9NZK7 142 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 C2orf16Q68DN1 1984 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 DKK1O94907 266 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 RPL35AP18077 110 aaKnown RBP7.03□□□□□ -1.28
SYNE1-209ENST00000367257 FUSP35637 526 aaKnown RBP eCLIP7.03□□□□□ -1.28
SYNE1-209ENST00000367257 K7ENP7 123 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 DAZ2Q13117 558 aaKnown RBP7.03□□□□□ -1.28
SYNE1-209ENST00000367257 KRTAP27-1Q3LI81 207 aa7.03□□□□□ -1.28
SYNE1-209ENST00000367257 DAZ4Q86SG3 579 aaKnown RBP7.03□□□□□ -1.28
SYNE1-209ENST00000367257 DAZ3Q9NR90 486 aaKnown RBP7.03□□□□□ -1.28
SYNE1-209ENST00000367257 K7EN84 100 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 HAMPP81172 84 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 HRCT1Q6UXD1 115 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 IGHV3-53P01767 116 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 IGF2-ASQ6U949 168 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 ZNRF2Q8NHG8 242 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 PIFOQ8TCI5 191 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 RNF138Q8WVD3 245 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 RETNQ9HD89 108 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 NUP210Q8TEM1 1887 aaPredicted RBP7.02□□□□□ -1.29
SYNE1-209ENST00000367257 ZNF106Q9H2Y7 1883 aaKnown RBP7.02□□□□□ -1.29
SYNE1-209ENST00000367257 TRBV10-2A0A0K0K1G8 114 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 LINC00173Q6ZV60 143 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 YPEL4Q96NS1 127 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 TIMM17AQ99595 171 aa7.02□□□□□ -1.29
SYNE1-209ENST00000367257 F6UB75 175 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 Q6ZR03 302 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 E9PLD3 99 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 CRYGBP07316 175 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 SPINK13Q1W4C9 94 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 GTSF1Q8WW33 167 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 CFHR4Q92496 578 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 LAMA1P25391 3075 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 PSMB8P28062 276 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 RNF144BQ7Z419 303 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 UBE2E2Q96LR5 201 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 RALGAPA1Q6GYQ0 2036 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 BRD3OSQ6XYD6 125 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 WFDC11Q8NEX6 87 aa7.01□□□□□ -1.29
SYNE1-209ENST00000367257 TDRD6O60522 2096 aaKnown RBP7□□□□□ -1.29
SYNE1-209ENST00000367257 SPENQ96T58 3664 aaKnown RBP7□□□□□ -1.29
SYNE1-209ENST00000367257 MLANAQ16655 118 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 C16orf74Q96GX8 76 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 K7EMT4 169 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 BAALC-AS2P0C853 105 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 FRYLO94915 3013 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 SUMO4Q6EEV6 95 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 WDR86Q86TI4 376 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 DEFB130BP0DP73 79 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 DEFB130AP0DP74 79 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 NRGNQ92686 78 aa7□□□□□ -1.29
SYNE1-209ENST00000367257 IGKV3D-7A0A0C4DH55 119 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 XGP55808 180 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
SYNE1-209ENST00000367257 MP68P56378 58 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 PROK2Q9HC23 129 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 KIF26BQ2KJY2 2108 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 TTC28Q96AY4 2481 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 ACACAQ13085 2346 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 C11orf86A6NJI1 115 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 GNLYP22749 145 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 C10orf105Q8TEF2 133 aa6.99□□□□□ -1.29
SYNE1-209ENST00000367257 C2orf70A6NJV1 201 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 EGR2P11161 476 aaPredicted RBP6.98□□□□□ -1.29
SYNE1-209ENST00000367257 GP9P14770 177 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 PFN2P35080 140 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 IGFL4Q6B9Z1 124 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 Q6Q795 121 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 Q8N1Y9 231 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 ZNF581Q9P0T4 197 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 XCL2Q9UBD3 114 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 NBASA2RRP1 2371 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 IGLC6P0CF74 106 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 NBL1P41271 181 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 IGF2BP2-AS1Q96M15 143 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 NDUFB1O75438 58 aa6.98□□□□□ -1.29
SYNE1-209ENST00000367257 CACNA1IQ9P0X4 2223 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 OPRPNQ99935 248 aaPredicted RBP6.97□□□□□ -1.29
SYNE1-209ENST00000367257 IMUPQ9GZP8 106 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 LHBP01229 141 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 C9orf47Q6ZRZ4 202 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 AGPAT4-IT1Q9H0P7 198 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 ICOSQ9Y6W8 199 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 ZFP2Q6ZN57 461 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 MRPL36Q9P0J6 103 aaKnown RBP6.97□□□□□ -1.29
SYNE1-209ENST00000367257 KLK9Q9UKQ9 250 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 CACNA1HO95180 2353 aa6.97□□□□□ -1.29
SYNE1-209ENST00000367257 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.97□□□□□ -1.29
SYNE1-209ENST00000367257 PRB3Q04118 309 aaPredicted RBP6.96□□□□□ -1.29
SYNE1-209ENST00000367257 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.29
SYNE1-209ENST00000367257 TOMM6Q96B49 74 aa6.96□□□□□ -1.29
SYNE1-209ENST00000367257 MDC1Q14676 2089 aaKnown RBP6.96□□□□□ -1.29
SYNE1-209ENST00000367257 WDFY4Q6ZS81 3184 aa6.96□□□□□ -1.29
SYNE1-209ENST00000367257 RSPO1Q2MKA7 263 aaPredicted RBP6.96□□□□□ -1.29
SYNE1-209ENST00000367257 PRR30Q53SZ7 412 aaPredicted RBP6.96□□□□□ -1.29
SYNE1-209ENST00000367257 MPLKIPQ8TAP9 179 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms