RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 MBD3L5A6NJ08 208 aaPredicted RBP5.82□□□□□ -1.48
SYNE1-208ENST00000367256 C5orf24Q7Z6I8 188 aa5.82□□□□□ -1.48
SYNE1-208ENST00000367256 MBD3L2Q8NHZ7 208 aaPredicted RBP5.82□□□□□ -1.48
SYNE1-208ENST00000367256 IGHV4-28A0A0C4DH34 117 aa5.82□□□□□ -1.48
SYNE1-208ENST00000367256 LY6HO94772 140 aa5.82□□□□□ -1.48
SYNE1-208ENST00000367256 MSMBP08118 114 aa5.82□□□□□ -1.48
SYNE1-208ENST00000367256 TMEM105Q8N8V8 129 aa5.82□□□□□ -1.48
SYNE1-208ENST00000367256 NDUFS7O75251 213 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 IL15RAQ13261 267 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 MUC6Q6W4X9 2439 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 IGKV2D-24A0A075B6R9 120 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 RNF223E7ERA6 249 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 TEN1Q86WV5 123 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 B3GALT5-AS1P59052 145 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 TEX48A0A1B0GUV7 120 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 ZNF726P1Q15940 193 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 AMTNQ6UX39 209 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 SPATA25Q9BR10 227 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 ICOSQ9Y6W8 199 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 IGHV1-69DA0A0B4J2H0 117 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 IGHV7-4-1A0A0J9YVY3 117 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 C14orf132Q9NPU4 83 aa5.81□□□□□ -1.48
SYNE1-208ENST00000367256 B5MCH6 92 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 IGHV1-69P01742 117 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 ETDCA0A1B0GVM5 59 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 Q6ZQT7 251 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 ZNF747Q9BV97 191 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 FXYD5Q96DB9 178 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 ZNRD1Q9P1U0 126 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 MRPL55Q7Z7F7 128 aaKnown RBP5.8□□□□□ -1.48
SYNE1-208ENST00000367256 NOP10Q9NPE3 64 aaKnown RBP5.8□□□□□ -1.48
SYNE1-208ENST00000367256 ASPHD1Q5U4P2 390 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 G3V318 75 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 COX7B2Q8TF08 81 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 CFC1BP0CG36 223 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 CFC1P0CG37 223 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 HERV-K104P63124 156 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 IGFBPL1Q8WX77 278 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 RNF144BQ7Z419 303 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 CCDC168Q8NDH2 2452 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 IGKV1OR2-108A0A075B7D4 117 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 MLANAQ16655 118 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 FOXI2Q6ZQN5 318 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 DKK2Q9UBU2 259 aa5.8□□□□□ -1.48
SYNE1-208ENST00000367256 F8P00451 2351 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.79□□□□□ -1.48
SYNE1-208ENST00000367256 IGKV2-29A2NJV5 120 aaPredicted RBP5.79□□□□□ -1.48
SYNE1-208ENST00000367256 VSIG2Q96IQ7 327 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 A0A1B0GX51 115 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 Q8NFD4 153 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 WIPF3A6NGB9 483 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 NDUFB1O75438 58 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 ZFP2Q6ZN57 461 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 DYNAPQ8N1N2 210 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 CRIPAKQ8N1N5 446 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 RNF152Q8N8N0 203 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 CCL25O15444 150 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 NTN5Q8WTR8 489 aaPredicted RBP5.79□□□□□ -1.48
SYNE1-208ENST00000367256 FAM236AA0A1B0GUQ0 79 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 FAM236BA0A1B0GV22 79 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 H0YGX0 51 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
SYNE1-208ENST00000367256 TRAV4A0A0B4J268 109 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 ZMAT4Q9H898 229 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 CD59P13987 128 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 MRPL36Q9P0J6 103 aaKnown RBP5.78□□□□□ -1.48
SYNE1-208ENST00000367256 H3BUA1 57 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PTH2Q96A98 100 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 K7EQD1 137 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PSMB8P28062 276 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 MAPK1IP1LQ8NDC0 245 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 E7EQL1 145 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PRR20EP86478 221 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PRR20CP86479 221 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PRR20DP86480 221 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PRR20BP86481 221 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PRR20AP86496 221 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 FLG2Q5D862 2391 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-208ENST00000367256 VOPP1Q96AW1 172 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 PROP1O75360 226 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 HOXB4P17483 251 aaPredicted RBP5.78□□□□□ -1.48
SYNE1-208ENST00000367256 Q96MF0 132 aa5.78□□□□□ -1.48
SYNE1-208ENST00000367256 SEC61GP60059 68 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 C9orf47Q6ZRZ4 202 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 IGLV3-1P01715 115 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 ZNF503Q96F45 646 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 THSD7BQ9C0I4 1608 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 IGLL5B9A064 214 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 IGLC1P0CG04 106 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 A0A0J9YY99 117 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 J3QLI3 93 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 Q9HAA7 133 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 IGKV3D-7A0A0C4DH55 119 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 K7EN84 100 aa5.77□□□□□ -1.49
SYNE1-208ENST00000367256 Q71RC1 249 aaPredicted RBP5.77□□□□□ -1.49
SYNE1-208ENST00000367256 MUSTN1Q8IVN3 82 aa5.76□□□□□ -1.49
SYNE1-208ENST00000367256 TPSG1Q9NRR2 321 aa5.76□□□□□ -1.49
SYNE1-208ENST00000367256 C15orf65H3BRN8 121 aa5.76□□□□□ -1.49
SYNE1-208ENST00000367256 WT1-ASQ06250 92 aa5.76□□□□□ -1.49
SYNE1-208ENST00000367256 PCP2Q8IVA1 136 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms