RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ZNF503Q96F45 646 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 U3KQE9 123 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 Q8N7P7 452 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 TRGV2A0A075B6R0 118 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 PSMB8P28062 276 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 LY6EQ16553 131 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 ITLN2Q8WWU7 325 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 F8VRH5 84 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 F8WEM9 126 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 K7EMI3 77 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 MT-ATP8P03928 68 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 RPL32P62910 135 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 PTH2Q96A98 100 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGHV3-73A0A0B4J1V6 119 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 GATA3P23771 443 aa4.22□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGLV11-55A0A075B6I3 123 aa4.21□□□□□ -1.73
CDC42BPA-204ENST00000366767 IGKV3D-7A0A0C4DH55 119 aa4.21□□□□□ -1.73
CDC42BPA-204ENST00000366767 TEX22C9J3V5 150 aa4.21□□□□□ -1.73
CDC42BPA-204ENST00000366767 CRLF1O75462 422 aa4.21□□□□□ -1.73
CDC42BPA-204ENST00000366767 TRAV13-2A0A0B4J235 113 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 F6UB75 175 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 COX6B1P14854 86 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 ATP5J2P56134 94 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 C19orf71A6NCJ1 209 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGLV2-8P01709 118 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 TRBV25-1A0A075B6N4 114 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 C16orf54Q6UWD8 224 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGKV1D-37A0A075B6S9 117 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 TRPT1Q86TN4 253 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 C3orf22Q8N5N4 141 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 C7orf69Q9H7B7 122 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 J3QQQ9 107 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 K7EIM0 57 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 FXYD2P54710 66 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 LINC01545Q5VT33 79 aa4.21□□□□□ -1.74
CDC42BPA-204ENST00000366767 UQCRQO14949 82 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 WFDC9Q8NEX5 89 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 MBD6Q96DN6 1003 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 SPANXB1Q9NS25 103 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 C6orf226Q5I0X4 101 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 PRSS33Q8NF86 280 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 MLST8Q9BVC4 326 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 PRSS22Q9GZN4 317 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 ADAMTS20P59510 1910 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 NDUFA4O00483 81 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 HIGD1BQ9P298 99 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 TRAV26-2A0A0B4J265 109 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 A0A1B0GXF2 115 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 SAA4P35542 130 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 NDUFA12Q9UI09 145 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 UTRNP46939 3433 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 CRYGBP07316 175 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 LINC01620Q4KN68 170 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 C1orf195Q5TG92 126 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 ICOSQ9Y6W8 199 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 M0QXV9 152 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 A0A087WWL8 130 aa4.2□□□□□ -1.74
CDC42BPA-204ENST00000366767 SORL1Q92673 2214 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 C1orf229Q6ZS94 237 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 ORMDL1Q9P0S3 153 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 E7EUB6 86 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 PRB1P04280 392 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGFL4Q6B9Z1 124 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 ZNF493Q6ZR52 646 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 TRGV4A0A0C4DH28 118 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 ATP6V0E1O15342 81 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGKV1-17P01599 117 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 MYCNOSP40205 109 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 LINC00173Q6ZV60 143 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 C20orf78Q9BR46 151 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 NDUFC2-KCTD14E9PQ53 114 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 ASPHD1Q5U4P2 390 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 RAI1Q7Z5J4 1906 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 I3L3M4 83 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 DAD1P61803 113 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 HERVK_113P63121 156 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 BPTFQ12830 3046 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGHV1-69DA0A0B4J2H0 117 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 FAM236DA0A1B0GTK5 79 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 B4DSR2 109 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 IGHV1-69P01742 117 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 FAM236CP0DP71 79 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 HOXD3P31249 432 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 MPLKIPQ8TAP9 179 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 C1orf159Q96HA4 380 aa4.19□□□□□ -1.74
CDC42BPA-204ENST00000366767 TNRC6BQ9UPQ9 1833 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 PRRC2AP48634 2157 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 RIF1Q5UIP0 2472 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 SPATA12Q7Z6I5 190 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 STHQ8IWL8 128 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 WISP2O76076 250 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 RPL36AP83881 106 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 LRRC75A-AS1Q8N1F1 130 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 RPL36ALQ969Q0 106 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 CMC4P56277 68 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 GTSF1Q8WW33 167 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 BPESC1Q9GZL8 116 aa4.18□□□□□ -1.74
CDC42BPA-204ENST00000366767 PRR30Q53SZ7 412 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms