RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 Q96NJ1 140 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 CIB3Q96Q77 187 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 PBDC1Q9BVG4 233 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 LYRM2Q9NU23 88 aaPredicted RBP-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 MRPL36Q9P0J6 103 aaKnown RBP-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 COMMD3Q9UBI1 195 aa-0.99□□□□□ -2.57
RNU4-28P-201ENST00000364739 KNL1Q8NG31 2342 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 SPTAN1Q13813 2472 aaKnown RBP-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 FREM2Q5SZK8 3169 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 BBIP1A8MTZ0 92 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 C5orf58C9J3I9 102 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 K7EP34 96 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 TRACP01848 142 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 CSN2P05814 226 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 DEFB1P60022 68 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 MRPS36P82909 103 aaKnown RBP-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 RTL8BQ17RB0 113 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 KRTAP8-1Q8IUC2 63 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 TCTEX1D1Q8N7M0 179 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 NEK7Q8TDX7 302 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 RTL8AQ9BWD3 113 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 DNAH9Q9NYC9 4486 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 DNAH11Q96DT5 4516 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 FGD6Q6ZV73 1430 aa-1□□□□□ -2.57
RNU4-28P-201ENST00000364739 C5orf42Q9H799 3197 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 A0A096LNT2 108 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 IFNA6P05013 189 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 PPP1R2P41236 205 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 TMEM14BQ9NUH8 114 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 LRBAP50851 2863 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 TNS1Q9HBL0 1735 aaKnown RBP-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 DLEC1Q9Y238 1755 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 NUP210Q8TEM1 1887 aaPredicted RBP-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 SPTA1P02549 2419 aa-1.01□□□□□ -2.57
RNU4-28P-201ENST00000364739 DMDP11532 3685 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 HIGD1CA8MV81 97 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 M0R2T5 61 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 REEP5Q00765 189 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 SPAG17Q6Q759 2223 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 NAT14Q8WUY8 206 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 DIRC1Q969H9 104 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 CARD19Q96LW7 228 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 SH3BGRL3Q9H299 93 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 OTORQ9NRC9 128 aa-1.02□□□□□ -2.57
RNU4-28P-201ENST00000364739 SPEGQ15772 3267 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 KPNA4O00629 521 aaPredicted RBP-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 IGF2P01344 180 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 IGKCP01834 107 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 MPC1LP0DKB6 136 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 ETV6P41212 452 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 NDUFA6P56556 154 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 KLKP1Q107X0 134 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 TMEM229BQ8NBD8 167 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 OR4B1Q8NGF8 309 aa-1.03□□□□□ -2.57
RNU4-28P-201ENST00000364739 SPTBN5Q9NRC6 3674 aaKnown RBP-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 SMG6Q86US8 1419 aaKnown RBP-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 ARL5CA6NH57 179 aa-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 CAPZBP47756 277 aa-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 BORCS8Q96FH0 119 aa-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 MCEEQ96PE7 176 aa-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 AGPAT4-IT1Q9H0P7 198 aa-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 BIN3Q9NQY0 253 aa-1.04□□□□□ -2.58
RNU4-28P-201ENST00000364739 CDK12Q9NYV4 1490 aaPredicted RBP-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 LOC400499M0QZD8 3231 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 DNAH10Q8IVF4 4471 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 SMR3BP02814 79 aaPredicted RBP-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 COX6A2Q02221 97 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 LTC4SQ16873 150 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 IQCJQ1A5X6 159 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 CRYBG3Q68DQ2 2970 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 SPAG11AQ6PDA7 123 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 CEP19Q96LK0 163 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 FKBP11Q9NYL4 201 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 UNC13BO14795 1591 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 MYH1P12882 1939 aa-1.05□□□□□ -2.58
RNU4-28P-201ENST00000364739 LAMB1P07942 1786 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 TMEM30CPA0ZSE6 113 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 CDC42EP2O14613 210 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 MFSD11O43934 449 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 MT1FP04733 61 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 FABP2P12104 132 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 IL7P13232 177 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 DHRS4L2Q6PKH6 230 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 CROCCP2Q86T23 111 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 Q8IZM0 81 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 GINS3Q9BRX5 216 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 CEP290O15078 2479 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 ARHGAP31Q2M1Z3 1444 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 CEP350Q5VT06 3117 aa-1.06□□□□□ -2.58
RNU4-28P-201ENST00000364739 USF3Q68DE3 2245 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 CPDO75976 1380 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 MGAQ8IWI9 3026 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 EP400Q96L91 3159 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 TPST1O60507 370 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 YPEL1O60688 119 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 HSD11B1P28845 292 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 ARF6P62330 175 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 WFDC2Q14508 124 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 Q5VSD8 79 aa-1.07□□□□□ -2.58
RNU4-28P-201ENST00000364739 LYPD5Q6UWN5 251 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms