RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 FAM236BA0A1B0GV22 79 aa0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 J3QLW9 94 aa0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 MPC1LP0DKB6 136 aa0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 LINC00694P0DN24 101 aa0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 RPL37P61927 97 aaKnown RBP0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 FAM103A1Q9BTL3 118 aaKnown RBP0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 TMEM14BQ9NUH8 114 aa0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 CDK12Q9NYV4 1490 aaPredicted RBP0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 KNTC1P50748 2209 aa0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 HELZP42694 1942 aaKnown RBP0.72□□□□□ -2.29
RNU6-839P-201ENST00000363347 TRPM7Q96QT4 1865 aa0.71□□□□□ -2.3
RNU6-839P-201ENST00000363347 TEX49A0A1B0GTD5 131 aa0.71□□□□□ -2.3
RNU6-839P-201ENST00000363347 M0R129 80 aa0.71□□□□□ -2.3
RNU6-839P-201ENST00000363347 TMEM141Q96I45 108 aa0.71□□□□□ -2.3
RNU6-839P-201ENST00000363347 UHRF1BP1LA0JNW5 1464 aa0.71□□□□□ -2.3
RNU6-839P-201ENST00000363347 CTAGE3PQ8IX95 158 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 TSTD1Q8NFU3 115 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 SAR1AQ9NR31 198 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 COPZ2Q9P299 210 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 SPAG17Q6Q759 2223 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 ASH1LQ9NR48 2969 aaKnown RBP0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 OVOS2A0A0J9YW53 1432 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 DISP2A7MBM2 1401 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 OVOS2Q6IE36 1432 aa0.7□□□□□ -2.3
RNU6-839P-201ENST00000363347 K7ERU9 68 aa0.69□□□□□ -2.3
RNU6-839P-201ENST00000363347 TSPAN19P0C672 248 aa0.69□□□□□ -2.3
RNU6-839P-201ENST00000363347 SMCO1Q147U7 214 aa0.69□□□□□ -2.3
RNU6-839P-201ENST00000363347 SMIM21Q3B7S5 101 aa0.69□□□□□ -2.3
RNU6-839P-201ENST00000363347 IFI27L1Q96BM0 104 aa0.69□□□□□ -2.3
RNU6-839P-201ENST00000363347 COA4Q9NYJ1 87 aa0.69□□□□□ -2.3
RNU6-839P-201ENST00000363347 ERCC6Q03468 1493 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 TCRBV3S1A0A5B6 114 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 ZNF670-ZNF695F2Z2N8 137 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 BLMP54132 1417 aaPredicted RBP0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 MIC13Q5XKP0 118 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 OR2T2Q6IF00 324 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 PPP1R1CQ8WVI7 109 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 BET1LQ9NYM9 111 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 ERG28Q9UKR5 140 aa0.68□□□□□ -2.3
RNU6-839P-201ENST00000363347 CCDC179H3BU77 68 aa0.67□□□□□ -2.3
RNU6-839P-201ENST00000363347 PYYP10082 97 aa0.67□□□□□ -2.3
RNU6-839P-201ENST00000363347 ELOF1P60002 83 aaKnown RBP0.67□□□□□ -2.3
RNU6-839P-201ENST00000363347 NDUFA11Q86Y39 141 aa0.67□□□□□ -2.3
RNU6-839P-201ENST00000363347 TSKUQ8WUA8 353 aa0.67□□□□□ -2.3
RNU6-839P-201ENST00000363347 PLAC8Q9NZF1 115 aa0.67□□□□□ -2.3
RNU6-839P-201ENST00000363347 A0A096LNT2 108 aa0.66□□□□□ -2.3
RNU6-839P-201ENST00000363347 COX4I1P13073 169 aa0.66□□□□□ -2.3
RNU6-839P-201ENST00000363347 LINC01545Q5VT33 79 aa0.66□□□□□ -2.3
RNU6-839P-201ENST00000363347 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
RNU6-839P-201ENST00000363347 LOC285556D6RIA3 1793 aa0.65□□□□□ -2.3
RNU6-839P-201ENST00000363347 FHAD1B1AJZ9 1412 aa0.65□□□□□ -2.3
RNU6-839P-201ENST00000363347 TRAV12-2A0A075B6T6 113 aa0.65□□□□□ -2.31
RNU6-839P-201ENST00000363347 NCR2O95944 276 aa0.65□□□□□ -2.31
RNU6-839P-201ENST00000363347 CYP2G1PQ6ZSU1 146 aa0.65□□□□□ -2.31
RNU6-839P-201ENST00000363347 VSTM2AQ8TAG5 236 aa0.65□□□□□ -2.31
RNU6-839P-201ENST00000363347 NDUFA12Q9UI09 145 aa0.65□□□□□ -2.31
RNU6-839P-201ENST00000363347 ATG2AQ2TAZ0 1938 aa0.64□□□□□ -2.31
RNU6-839P-201ENST00000363347 NPFFO15130 113 aa0.64□□□□□ -2.31
RNU6-839P-201ENST00000363347 PRH1P02810 166 aa0.64□□□□□ -2.31
RNU6-839P-201ENST00000363347 PSMG3Q9BT73 122 aaPredicted RBP0.64□□□□□ -2.31
RNU6-839P-201ENST00000363347 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
RNU6-839P-201ENST00000363347 PIRTP0C851 137 aa0.63□□□□□ -2.31
RNU6-839P-201ENST00000363347 NPC2P61916 151 aa0.63□□□□□ -2.31
RNU6-839P-201ENST00000363347 EMX2Q04743 252 aa0.63□□□□□ -2.31
RNU6-839P-201ENST00000363347 TPT1P8Q9HAU6 139 aa0.63□□□□□ -2.31
RNU6-839P-201ENST00000363347 ABCA4P78363 2273 aa0.63□□□□□ -2.31
RNU6-839P-201ENST00000363347 CASZ1Q86V15 1759 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 RREB1Q92766 1687 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 PITX3O75364 302 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 COPZ1P61923 177 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 RPS25P62851 125 aaKnown RBP0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 SPCS2Q15005 226 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 Q6ZUT4 128 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 PFDN5Q99471 154 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 DLEC1Q9Y238 1755 aa0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 PRG4Q92954 1404 aaPredicted RBP0.62□□□□□ -2.31
RNU6-839P-201ENST00000363347 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 PTPRMP28827 1452 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 BCORL1Q5H9F3 1711 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 ESPL1Q14674 2120 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 TRAV12-3A0A0B4J271 114 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 RBAKDNA6NC62 111 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 RRAS2P62070 204 aaPredicted RBP0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 SPANXN1Q5VSR9 72 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 SMR3AQ99954 134 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 SOGA1O94964 1423 aa0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 AFDNP55196 1824 aaKnown RBP0.61□□□□□ -2.31
RNU6-839P-201ENST00000363347 CCL3L1P16619 93 aa0.6□□□□□ -2.31
RNU6-839P-201ENST00000363347 C20orf197Q8N268 126 aa0.6□□□□□ -2.31
RNU6-839P-201ENST00000363347 FRAS1Q86XX4 4008 aa0.6□□□□□ -2.31
RNU6-839P-201ENST00000363347 CDK5RAP2Q96SN8 1893 aa0.59□□□□□ -2.31
RNU6-839P-201ENST00000363347 NAV3Q8IVL0 2385 aa0.59□□□□□ -2.31
RNU6-839P-201ENST00000363347 F2Z2F3 143 aa0.59□□□□□ -2.31
RNU6-839P-201ENST00000363347 SSBP1Q04837 148 aaKnown RBP0.59□□□□□ -2.31
RNU6-839P-201ENST00000363347 RPL7L1Q6DKI1 246 aaKnown RBP0.59□□□□□ -2.31
RNU6-839P-201ENST00000363347 SLC48A1Q6P1K1 146 aa0.59□□□□□ -2.31
RNU6-839P-201ENST00000363347 C4orf33Q8N1A6 199 aa0.59□□□□□ -2.31
RNU6-839P-201ENST00000363347 CEP152O94986 1710 aa0.58□□□□□ -2.32
RNU6-839P-201ENST00000363347 A6NIN4 97 aa0.58□□□□□ -2.32
RNU6-839P-201ENST00000363347 MCRIP1C9JLW8 97 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms