RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 LINC01356Q8N9X3 169 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 UQCRQO14949 82 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 LY6DQ14210 128 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 TRPM7Q96QT4 1865 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 RBX1P62877 108 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 PIFOQ8TCI5 191 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 C14orf132Q9NPU4 83 aa10.47□□□□□ -0.73
CCDC144A-203ENST00000360495 SPATA25Q9BR10 227 aa10.46□□□□□ -0.73
CCDC144A-203ENST00000360495 PKDREJQ9NTG1 2253 aa10.46□□□□□ -0.73
CCDC144A-203ENST00000360495 C11orf86A6NJI1 115 aa10.46□□□□□ -0.73
CCDC144A-203ENST00000360495 MRPL55Q7Z7F7 128 aaKnown RBP10.46□□□□□ -0.73
CCDC144A-203ENST00000360495 Q8N1Y9 231 aa10.46□□□□□ -0.74
CCDC144A-203ENST00000360495 PROK2Q9HC23 129 aa10.46□□□□□ -0.74
CCDC144A-203ENST00000360495 SPANXB1Q9NS25 103 aaPredicted RBP10.46□□□□□ -0.74
CCDC144A-203ENST00000360495 MSMBP08118 114 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 FAM167A-AS1Q96KT0 104 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 NOP10Q9NPE3 64 aaKnown RBP10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 RNF114Q9Y508 228 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 SPTBN2O15020 2390 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 UBE2BP63146 152 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 DEFB121Q5J5C9 76 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 SPTSSBQ8NFR3 76 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 SIPA1L1O43166 1804 aa10.45□□□□□ -0.74
CCDC144A-203ENST00000360495 C8orf31Q8N9H6 132 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 CREBBPQ92793 2442 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 TRAV23DV6A0A075B6W5 121 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 Q6ZS92 163 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 PKIGQ9Y2B9 76 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 SPTAN1Q13813 2472 aaKnown RBP10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 Q6ZQT7 251 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 ETDCA0A1B0GVM5 59 aa10.44□□□□□ -0.74
CCDC144A-203ENST00000360495 A0A0U1RQV1 116 aa10.43□□□□□ -0.74
CCDC144A-203ENST00000360495 H3BQ85 93 aa10.43□□□□□ -0.74
CCDC144A-203ENST00000360495 C20orf197Q8N268 126 aa10.43□□□□□ -0.74
CCDC144A-203ENST00000360495 MPLKIPQ8TAP9 179 aa10.43□□□□□ -0.74
CCDC144A-203ENST00000360495 C22orf46C9J442 243 aa10.43□□□□□ -0.74
CCDC144A-203ENST00000360495 FAM236DA0A1B0GTK5 79 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 I3L2K1 104 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 IGLV1-44P01699 117 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 TRBV12-3P01733 135 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 IGLC6P0CF74 106 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 Q9HAA7 133 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 BUB3O43684 328 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 IGKV1-17P01599 117 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 CTRLP40313 264 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 RMI2Q96E14 147 aa10.42□□□□□ -0.74
CCDC144A-203ENST00000360495 GATA3P23771 443 aa10.41□□□□□ -0.74
CCDC144A-203ENST00000360495 C3orf22Q8N5N4 141 aa10.41□□□□□ -0.74
CCDC144A-203ENST00000360495 V9GYY9 64 aa10.41□□□□□ -0.74
CCDC144A-203ENST00000360495 TEX49A0A1B0GTD5 131 aa10.41□□□□□ -0.74
CCDC144A-203ENST00000360495 IGKV1OR2-108A0A075B7D4 117 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 A0A0J9YY99 117 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 K7EIM0 57 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 UPK3BQ9BT76 320 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 NCR3O14931 201 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 PROP1O75360 226 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 NDUFB1O75438 58 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 DOCK7Q96N67 2140 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 LOXL1Q08397 574 aaPredicted RBP10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 TP73-AS1Q9UF72 201 aa10.4□□□□□ -0.74
CCDC144A-203ENST00000360495 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.75
CCDC144A-203ENST00000360495 H3BUA1 57 aa10.4□□□□□ -0.75
CCDC144A-203ENST00000360495 TMEM256-PLSCR3K7ERE1 68 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 C16orf54Q6UWD8 224 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 C11orf53Q8IXP5 236 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 GNLYP22749 145 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 FGF23Q9GZV9 251 aaPredicted RBP10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 KAAG1Q9UBP8 84 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 SHANK1Q9Y566 2161 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 HIGD2BQ4VC39 106 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 SDIM1Q6ZPB5 146 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 K7EQD1 137 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 COX7A2LO14548 114 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 TNRC6AQ8NDV7 1962 aaKnown RBP10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 CNOT1A5YKK6 2376 aaKnown RBP10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 KMT2EQ8IZD2 1858 aa10.39□□□□□ -0.75
CCDC144A-203ENST00000360495 FAM240AA0A1B0GVK7 77 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 APOC4P55056 127 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 CAMK2N2Q96S95 79 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 IGKV2D-26A0A0A0MRZ7 120 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 PRAC2D3DTV9 90 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 DAZ2Q13117 558 aaKnown RBP10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 DAZ4Q86SG3 579 aaKnown RBP10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 DAZ3Q9NR90 486 aaKnown RBP10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 EML6Q6ZMW3 1958 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 CGB3P0DN86 165 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 LYPD6Q86Y78 171 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 ANK1P16157 1881 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 C19orf71A6NCJ1 209 aa10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
CCDC144A-203ENST00000360495 USF3Q68DE3 2245 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 WI2-2373I1.2A0A1W2PRP0 233 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 MIR7-3HGQ8N6C7 128 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 ZNF503Q96F45 646 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 ELANEP08246 267 aa10.37□□□□□ -0.75
CCDC144A-203ENST00000360495 ZNF407Q9C0G0 2248 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms