RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 LRRK2Q5S007 2527 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 CXCL5P42830 114 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 LINC01620Q4KN68 170 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 RNASE13Q5GAN3 156 aaKnown RBP10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 MRPL53Q96EL3 112 aaKnown RBP10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 ELANEP08246 267 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 TDRG1Q3Y452 100 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 A0A0G2JNJ9 132 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 ZNF581Q9P0T4 197 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 Q9UFV3 132 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 IGHV1-69DA0A0B4J2H0 117 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 IGHV1-69P01742 117 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 Q6P435 159 aa10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 KLK5Q9Y337 293 aaPredicted RBP10.54□□□□□ -0.72
SRGAP3-201ENST00000360413 ZC2HC1AQ96GY0 325 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 IGF2BP2-AS1Q96M15 143 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 WIPF2Q8TF74 440 aaPredicted RBP10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 CRYGBP07316 175 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 Q8NFD4 153 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 VSIG2Q96IQ7 327 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 C9orf66Q5T8R8 295 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 PCNX3Q9H6A9 2034 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 HIGD2BQ4VC39 106 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 RNF144BQ7Z419 303 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 MPLKIPQ8TAP9 179 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 KLK9Q9UKQ9 250 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 ZNF106Q9H2Y7 1883 aaKnown RBP10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 CFHR3Q02985 330 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 BRD3OSQ6XYD6 125 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 ZNRF2Q8NHG8 242 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 BPESC1Q9GZL8 116 aa10.53□□□□□ -0.72
SRGAP3-201ENST00000360413 RBAKDNA6NC62 111 aa10.52□□□□□ -0.72
SRGAP3-201ENST00000360413 TRBV19A0A075B6N1 114 aa10.52□□□□□ -0.72
SRGAP3-201ENST00000360413 ZFP2Q6ZN57 461 aa10.52□□□□□ -0.72
SRGAP3-201ENST00000360413 RNF183Q96D59 192 aa10.52□□□□□ -0.73
SRGAP3-201ENST00000360413 OPRPNQ99935 248 aaPredicted RBP10.52□□□□□ -0.73
SRGAP3-201ENST00000360413 IGHV4-28A0A0C4DH34 117 aa10.52□□□□□ -0.73
SRGAP3-201ENST00000360413 JMJD7-PLA2G4BH0Y9G9 81 aa10.52□□□□□ -0.73
SRGAP3-201ENST00000360413 RPL18AQ02543 176 aaKnown RBP10.52□□□□□ -0.73
SRGAP3-201ENST00000360413 GAFA1Q96PS6 74 aa10.52□□□□□ -0.73
SRGAP3-201ENST00000360413 PRR15LQ9BU68 103 aa10.52□□□□□ -0.73
SRGAP3-201ENST00000360413 PRR25Q96S07 402 aa10.51□□□□□ -0.73
SRGAP3-201ENST00000360413 K7EN84 100 aa10.51□□□□□ -0.73
SRGAP3-201ENST00000360413 ATP5G1P05496 136 aa10.51□□□□□ -0.73
SRGAP3-201ENST00000360413 LMO1P25800 156 aa10.51□□□□□ -0.73
SRGAP3-201ENST00000360413 GGNQ86UU5 652 aa10.51□□□□□ -0.73
SRGAP3-201ENST00000360413 C16orf74Q96GX8 76 aa10.5□□□□□ -0.73
SRGAP3-201ENST00000360413 NDUFV3P56181 108 aaKnown RBP10.5□□□□□ -0.73
SRGAP3-201ENST00000360413 NREPQ16612 68 aa10.5□□□□□ -0.73
SRGAP3-201ENST00000360413 Q9H8V8 135 aa10.5□□□□□ -0.73
SRGAP3-201ENST00000360413 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
SRGAP3-201ENST00000360413 UBE2AP49459 152 aa10.5□□□□□ -0.73
SRGAP3-201ENST00000360413 GNLYP22749 145 aa10.49□□□□□ -0.73
SRGAP3-201ENST00000360413 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
SRGAP3-201ENST00000360413 DYNAPQ8N1N2 210 aa10.49□□□□□ -0.73
SRGAP3-201ENST00000360413 ATP6V0E2Q8NHE4 81 aa10.49□□□□□ -0.73
SRGAP3-201ENST00000360413 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
SRGAP3-201ENST00000360413 Q8TCH9 128 aa10.48□□□□□ -0.73
SRGAP3-201ENST00000360413 FXYD2P54710 66 aa10.48□□□□□ -0.73
SRGAP3-201ENST00000360413 COX7A2LO14548 114 aa10.48□□□□□ -0.73
SRGAP3-201ENST00000360413 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
SRGAP3-201ENST00000360413 IGHV4-4A0A075B6R2 117 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 ATP6V0E1O15342 81 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 NDUFA4L2Q9NRX3 87 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 LTAP01374 205 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 TMEM256-PLSCR3K7ERE1 68 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 CLPSL2Q6UWE3 100 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 A4D1N5 150 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 CAMK2N2Q96S95 79 aa10.47□□□□□ -0.73
SRGAP3-201ENST00000360413 IGHV7-4-1A0A0J9YVY3 117 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 XCL1P47992 114 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 CASC2Q6XLA1 102 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 Q6ZUT4 128 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 ZNF833PQ6ZTB9 187 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 LINC00311Q8N616 119 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 Q96MF0 132 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 NOTCH4Q99466 2003 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 COA6Q5JTJ3 125 aaKnown RBP10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 C9orf47Q6ZRZ4 202 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 Q6ZS92 163 aa10.46□□□□□ -0.73
SRGAP3-201ENST00000360413 LGALS9O00182 355 aa10.46□□□□□ -0.74
SRGAP3-201ENST00000360413 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 FXYD5Q96DB9 178 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 FOXE3Q13461 319 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 TEX36Q5VZQ5 186 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 B9D2Q9BPU9 175 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 ALPK3Q96L96 1907 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 ETV2O00321 342 aaPredicted RBP10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 FAM120AOSQ5T036 256 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 C11orf52Q96A22 123 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 VPREB3Q9UKI3 123 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 TMEM61Q8N0U2 210 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 IGKV1OR2-108A0A075B7D4 117 aa10.45□□□□□ -0.74
SRGAP3-201ENST00000360413 SP5Q6BEB4 398 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms