RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 C18orf32Q8TCD1 76 aa9.94□□□□□ -0.82
CCDC197-201ENST00000359253 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
CCDC197-201ENST00000359253 TRAV12-2A0A075B6T6 113 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 CRXO43186 299 aaPredicted RBP9.93□□□□□ -0.82
CCDC197-201ENST00000359253 GNRH2O43555 120 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 NXPH4O95158 308 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 CD7P09564 240 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 RNASE3P12724 160 aaKnown RBP9.93□□□□□ -0.82
CCDC197-201ENST00000359253 AKR1D1P51857 326 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 MORN3Q6PF18 240 aaPredicted RBP9.93□□□□□ -0.82
CCDC197-201ENST00000359253 Q6ZQT7 251 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 SYT8Q8NBV8 401 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 OR10AG1Q8NH19 301 aa9.93□□□□□ -0.82
CCDC197-201ENST00000359253 PIK3CD-AS1Q5SR53 167 aa9.92□□□□□ -0.82
CCDC197-201ENST00000359253 PTH2Q96A98 100 aa9.92□□□□□ -0.82
CCDC197-201ENST00000359253 CHCHD1Q96BP2 118 aaKnown RBP9.92□□□□□ -0.82
CCDC197-201ENST00000359253 C9orf85Q96MD7 179 aa9.92□□□□□ -0.82
CCDC197-201ENST00000359253 C1QTNF4Q9BXJ3 329 aa9.92□□□□□ -0.82
CCDC197-201ENST00000359253 TRRAPQ9Y4A5 3859 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 IGHV3-16A0A0C4DH30 117 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 RBMY1BA6NDE4 496 aaKnown RBP9.91□□□□□ -0.82
CCDC197-201ENST00000359253 RBMY1EA6NEQ0 496 aaKnown RBP9.91□□□□□ -0.82
CCDC197-201ENST00000359253 WIPF1O43516 503 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 RBMY1DP0C7P1 496 aaKnown RBP9.91□□□□□ -0.82
CCDC197-201ENST00000359253 RAB4AP20338 218 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 PMCHP20382 165 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 CKS2P33552 79 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
CCDC197-201ENST00000359253 GTSCR1Q86UQ5 136 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 MRAP2Q96G30 205 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 HIST1H2BLQ99880 126 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 C19orf73Q9NVV2 129 aa9.91□□□□□ -0.82
CCDC197-201ENST00000359253 WNK1Q9H4A3 2382 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 IFITM10A6NMD0 228 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 SERF1AO75920 110 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 PPP1R17O96001 155 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 FABP4P15090 132 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 ZNF124Q15973 351 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 Q8N1Y9 231 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 PRELID3AQ96N28 172 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 NDUFAF3Q9BU61 184 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 DPH3P1Q9H4G8 78 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 MSRB1Q9NZV6 116 aa9.9□□□□□ -0.82
CCDC197-201ENST00000359253 MUC21A0A0G2JKD1 596 aa9.89□□□□□ -0.83
CCDC197-201ENST00000359253 MUC21A0A140T8X8 626 aa9.89□□□□□ -0.83
CCDC197-201ENST00000359253 CBY3A6NI87 242 aa9.89□□□□□ -0.83
CCDC197-201ENST00000359253 SMIM6P0DI80 62 aa9.89□□□□□ -0.83
CCDC197-201ENST00000359253 RNF185Q96GF1 192 aa9.89□□□□□ -0.83
CCDC197-201ENST00000359253 LINC01587Q99440 93 aa9.89□□□□□ -0.83
CCDC197-201ENST00000359253 SPXQ9BT56 116 aa9.89□□□□□ -0.83
CCDC197-201ENST00000359253 D6R8Y8 96 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 M0R381 172 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 HSBP1O75506 76 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 LINC00614P0C842 121 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 SMIM17P0DL12 118 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 EVI2AP22794 236 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 SSTP61278 116 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 ZNF415Q09FC8 603 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 PDZD11Q5EBL8 140 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 NIT1Q86X76 327 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 DEFB125Q8N687 156 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 POM121L12Q8N7R1 296 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 OR10D4PQ8NGN7 298 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 SAMD10Q9BYL1 202 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 GSN-AS1Q9NRJ2 163 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 ZMAT5Q9UDW3 170 aaKnown RBP9.88□□□□□ -0.83
CCDC197-201ENST00000359253 TIMM8BQ9Y5J9 83 aaPredicted RBP9.88□□□□□ -0.83
CCDC197-201ENST00000359253 PKD1L1Q8TDX9 2849 aa9.88□□□□□ -0.83
CCDC197-201ENST00000359253 PRSS47A8MTI9 375 aa9.87□□□□□ -0.83
CCDC197-201ENST00000359253 FXYD7P58549 80 aa9.87□□□□□ -0.83
CCDC197-201ENST00000359253 LINC00310P59036 64 aa9.87□□□□□ -0.83
CCDC197-201ENST00000359253 GOLT1BQ9Y3E0 138 aa9.87□□□□□ -0.83
CCDC197-201ENST00000359253 VWFP04275 2813 aa9.87□□□□□ -0.83
CCDC197-201ENST00000359253 NUPR1O60356 82 aa9.86□□□□□ -0.83
CCDC197-201ENST00000359253 RBMY1A1P0DJD3 496 aaKnown RBP9.86□□□□□ -0.83
CCDC197-201ENST00000359253 RBMY1CP0DJD4 496 aa9.86□□□□□ -0.83
CCDC197-201ENST00000359253 RBMY1FQ15415 496 aaKnown RBP9.86□□□□□ -0.83
CCDC197-201ENST00000359253 LINC00518Q8N0U6 118 aa9.86□□□□□ -0.83
CCDC197-201ENST00000359253 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
CCDC197-201ENST00000359253 MAP1LC3AQ9H492 121 aa9.86□□□□□ -0.83
CCDC197-201ENST00000359253 MDFICQ9P1T7 246 aa9.86□□□□□ -0.83
CCDC197-201ENST00000359253 MGAM2Q2M2H8 2515 aa9.86□□□□□ -0.83
CCDC197-201ENST00000359253 AMTP48728 403 aa9.85□□□□□ -0.83
CCDC197-201ENST00000359253 IQCJQ1A5X6 159 aa9.85□□□□□ -0.83
CCDC197-201ENST00000359253 FA2HQ7L5A8 372 aa9.85□□□□□ -0.83
CCDC197-201ENST00000359253 RCHY1Q96PM5 261 aa9.85□□□□□ -0.83
CCDC197-201ENST00000359253 TMEM208Q9BTX3 173 aa9.85□□□□□ -0.83
CCDC197-201ENST00000359253 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
CCDC197-201ENST00000359253 AP5S1Q9NUS5 200 aa9.85□□□□□ -0.83
CCDC197-201ENST00000359253 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
CCDC197-201ENST00000359253 M0R2P5 195 aa9.84□□□□□ -0.83
CCDC197-201ENST00000359253 TNFRSF6BO95407 300 aa9.84□□□□□ -0.83
CCDC197-201ENST00000359253 SAMD5Q5TGI4 173 aa9.84□□□□□ -0.83
CCDC197-201ENST00000359253 RNASEKQ6P5S7 137 aaKnown RBP9.84□□□□□ -0.83
CCDC197-201ENST00000359253 C20orf78Q9BR46 151 aa9.84□□□□□ -0.83
CCDC197-201ENST00000359253 KIF25-AS1Q9Y6Z4 181 aa9.84□□□□□ -0.83
CCDC197-201ENST00000359253 AGRNO00468 2067 aa9.83□□□□□ -0.84
CCDC197-201ENST00000359253 LINC01546A6NGU7 62 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms