RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ORMDL2Q53FV1 153 aa7.76□□□□□ -1.17
RNF40-202ENST00000357890 C2orf66Q6UXQ4 117 aa7.76□□□□□ -1.17
RNF40-202ENST00000357890 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
RNF40-202ENST00000357890 Q8NA96 180 aa7.76□□□□□ -1.17
RNF40-202ENST00000357890 CLEC19AQ6UXS0 136 aa7.76□□□□□ -1.17
RNF40-202ENST00000357890 TCL1BO95988 128 aa7.76□□□□□ -1.17
RNF40-202ENST00000357890 TACC2O95359 2948 aa7.76□□□□□ -1.17
RNF40-202ENST00000357890 TNFRSF13BO14836 293 aaPredicted RBP7.75□□□□□ -1.17
RNF40-202ENST00000357890 FCN3O75636 299 aa7.75□□□□□ -1.17
RNF40-202ENST00000357890 C15orf32Q32M92 178 aa7.75□□□□□ -1.17
RNF40-202ENST00000357890 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
RNF40-202ENST00000357890 RELNP78509 3460 aa7.75□□□□□ -1.17
RNF40-202ENST00000357890 NDUFV3P56181 108 aaKnown RBP7.75□□□□□ -1.17
RNF40-202ENST00000357890 PDE6HQ13956 83 aa7.75□□□□□ -1.17
RNF40-202ENST00000357890 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
RNF40-202ENST00000357890 PRO1854Q9UHT4 67 aa7.75□□□□□ -1.17
RNF40-202ENST00000357890 NFE4Q86UQ8 179 aa7.74□□□□□ -1.17
RNF40-202ENST00000357890 FSTL3O95633 263 aa7.74□□□□□ -1.17
RNF40-202ENST00000357890 LGALS1P09382 135 aaKnown RBP7.74□□□□□ -1.17
RNF40-202ENST00000357890 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
RNF40-202ENST00000357890 METTL26Q96S19 204 aa7.74□□□□□ -1.17
RNF40-202ENST00000357890 RAI1Q7Z5J4 1906 aaPredicted RBP7.74□□□□□ -1.17
RNF40-202ENST00000357890 IGLV2-11P01706 119 aa7.74□□□□□ -1.17
RNF40-202ENST00000357890 CRYGBP07316 175 aa7.74□□□□□ -1.17
RNF40-202ENST00000357890 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
RNF40-202ENST00000357890 PLEKHB2Q96CS7 222 aa7.74□□□□□ -1.17
RNF40-202ENST00000357890 SPTBN4Q9H254 2564 aa7.74□□□□□ -1.17
RNF40-202ENST00000357890 IGHV3OR16-10A0A075B7F0 116 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 TRAV4A0A0B4J268 109 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 WI2-2373I1.2A0A1W2PRP0 233 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 ADARB2-AS1A8MUL3 147 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 GRNP28799 593 aaKnown RBP7.73□□□□□ -1.17
RNF40-202ENST00000357890 LINC00527Q9UJ94 153 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 SORL1Q92673 2214 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 IGKV3D-20A0A0C4DH25 116 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 RS1O15537 224 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 IGKV3-20P01619 116 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 VMO1Q7Z5L0 202 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 PIP4P2Q8N4L2 257 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 HHLA3Q9XRX5 114 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 H3BMM0 161 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 CFAP126Q5VTH2 177 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 CFHR4Q92496 578 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 UBE2WQ96B02 151 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 TLN2Q9Y4G6 2542 aa7.73□□□□□ -1.17
RNF40-202ENST00000357890 ABCA2Q9BZC7 2435 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 M0R1W7 72 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 ATXN8Q156A1 80 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 RNASE4P34096 147 aaKnown RBP7.72□□□□□ -1.17
RNF40-202ENST00000357890 SUMO2P61956 95 aaKnown RBP7.72□□□□□ -1.17
RNF40-202ENST00000357890 NDPQ00604 133 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 CDIP1Q9H305 208 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 YAE1D1Q9NRH1 226 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 DYNAPQ8N1N2 210 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 RPL39LQ96EH5 51 aaKnown RBP7.72□□□□□ -1.17
RNF40-202ENST00000357890 EDA2RQ9HAV5 297 aa7.72□□□□□ -1.17
RNF40-202ENST00000357890 ASIPP42127 132 aa7.71□□□□□ -1.17
RNF40-202ENST00000357890 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.17
RNF40-202ENST00000357890 OR10J6PQ8NGY7 276 aa7.71□□□□□ -1.17
RNF40-202ENST00000357890 CCDC168Q8NDH2 2452 aa7.71□□□□□ -1.18
RNF40-202ENST00000357890 PMVKQ15126 192 aa7.71□□□□□ -1.18
RNF40-202ENST00000357890 CHCHD5Q9BSY4 110 aa7.71□□□□□ -1.18
RNF40-202ENST00000357890 A4D1N5 150 aa7.71□□□□□ -1.18
RNF40-202ENST00000357890 LINC01548A6NM66 108 aa7.71□□□□□ -1.18
RNF40-202ENST00000357890 MYO9AB2RTY4 2548 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 A0A087WWL8 130 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 PRAC2D3DTV9 90 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 MRGPRG-AS1Q2M3A8 158 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 ATP6V0E2Q8NHE4 81 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 OOSP1A8MZH6 123 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 PHLDA1Q8WV24 401 aaPredicted RBP7.7□□□□□ -1.18
RNF40-202ENST00000357890 DUX3Q96PT4 197 aa7.7□□□□□ -1.18
RNF40-202ENST00000357890 CHD8Q9HCK8 2581 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 G3V318 75 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 EEF1AKMT3Q96AZ1 226 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 FANCD2OSQ96PS1 177 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 ID1P41134 155 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 MINOS1Q5TGZ0 78 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 MORN3Q6PF18 240 aaPredicted RBP7.69□□□□□ -1.18
RNF40-202ENST00000357890 NDUFA11Q86Y39 141 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 MINOS1-NBL1R4GNA1 71 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 IGLV11-55A0A075B6I3 123 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 TRBV6-1A0A0K0K1D8 114 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 DUSP14O95147 198 aaKnown RBP7.69□□□□□ -1.18
RNF40-202ENST00000357890 CTSGP08311 255 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 CFC1BP0CG36 223 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 CFC1P0CG37 223 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 Q6ZQT7 251 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 TMEM219Q86XT9 240 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 NPBQ8NG41 125 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 SLC50A1Q9BRV3 221 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 SPXQ9BT56 116 aa7.69□□□□□ -1.18
RNF40-202ENST00000357890 FAM236AA0A1B0GUQ0 79 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 FAM236BA0A1B0GV22 79 aa7.68□□□□□ -1.18
RNF40-202ENST00000357890 LY6LH3BQJ8 138 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms