RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 GPHB5Q86YW7 130 aa17.94■□□□□ 0.46
NPAS3-203ENST00000357798 A0A0J9YY99 117 aa17.93■□□□□ 0.46
NPAS3-203ENST00000357798 LINC01548A6NM66 108 aa17.93■□□□□ 0.46
NPAS3-203ENST00000357798 VCX2Q9H322 139 aa17.93■□□□□ 0.46
NPAS3-203ENST00000357798 IGLV4-69A0A075B6H9 119 aa17.93■□□□□ 0.46
NPAS3-203ENST00000357798 C11orf86A6NJI1 115 aa17.93■□□□□ 0.46
NPAS3-203ENST00000357798 DUSP14O95147 198 aaKnown RBP17.93■□□□□ 0.46
NPAS3-203ENST00000357798 KLHL30-AS1Q8NEE0 82 aa17.93■□□□□ 0.46
NPAS3-203ENST00000357798 ACACAQ13085 2346 aa17.93■□□□□ 0.46
NPAS3-203ENST00000357798 TEN1Q86WV5 123 aa17.92■□□□□ 0.46
NPAS3-203ENST00000357798 TRBV20-1A0A075B6N2 111 aa17.91■□□□□ 0.46
NPAS3-203ENST00000357798 SPINK8P0C7L1 97 aa17.91■□□□□ 0.46
NPAS3-203ENST00000357798 SBSPONQ8IVN8 264 aa17.91■□□□□ 0.46
NPAS3-203ENST00000357798 FAM19A4Q96LR4 140 aa17.91■□□□□ 0.46
NPAS3-203ENST00000357798 DMXL1Q9Y485 3027 aa17.91■□□□□ 0.46
NPAS3-203ENST00000357798 NXPH4O95158 308 aa17.91■□□□□ 0.46
NPAS3-203ENST00000357798 APRG1Q8IVJ8 170 aa17.91■□□□□ 0.46
NPAS3-203ENST00000357798 SOCS3O14543 225 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 TSHBP01222 138 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 FHL3Q13643 280 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 GEMIN7Q9H840 131 aaKnown RBP17.9■□□□□ 0.46
NPAS3-203ENST00000357798 LAMA5O15230 3695 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 PMVKQ15126 192 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 Q6ZUT4 128 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 CARD19Q96LW7 228 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 AKAP13Q12802 2813 aa17.9■□□□□ 0.46
NPAS3-203ENST00000357798 IGIPA6NJ69 53 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 SFTA2Q6UW10 78 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 IGHV4OR15-8A0A075B7B6 117 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 A0A087WW49 117 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 FAM223BA6NKX1 122 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 RNASE3P12724 160 aaKnown RBP17.89■□□□□ 0.45
NPAS3-203ENST00000357798 FAM223AQ8IWN6 122 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 TMEM141Q96I45 108 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 CLUHP3Q96NS8 147 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 TP53TG1Q9Y2A0 90 aa17.89■□□□□ 0.45
NPAS3-203ENST00000357798 ANKHD1Q8IWZ3 2542 aaKnown RBP17.88■□□□□ 0.45
NPAS3-203ENST00000357798 TCL1BO95988 128 aa17.88■□□□□ 0.45
NPAS3-203ENST00000357798 SAA4P35542 130 aa17.88■□□□□ 0.45
NPAS3-203ENST00000357798 IGHV3-30P01768 117 aa17.88■□□□□ 0.45
NPAS3-203ENST00000357798 MT-ATP8P03928 68 aa17.88■□□□□ 0.45
NPAS3-203ENST00000357798 IGHV3-30-5P0DP03 117 aa17.88■□□□□ 0.45
NPAS3-203ENST00000357798 C5orf56Q8N8D9 126 aa17.88■□□□□ 0.45
NPAS3-203ENST00000357798 DCHS2Q6V1P9 2916 aa17.88■□□□□ 0.45
NPAS3-203ENST00000357798 TRBV7-9A0A0J9YWB2 115 aa17.87■□□□□ 0.45
NPAS3-203ENST00000357798 PTH2Q96A98 100 aa17.87■□□□□ 0.45
NPAS3-203ENST00000357798 KIF25-AS1Q9Y6Z4 181 aa17.87■□□□□ 0.45
NPAS3-203ENST00000357798 RNASE4P34096 147 aaKnown RBP17.87■□□□□ 0.45
NPAS3-203ENST00000357798 SLC25A29Q8N8R3 303 aa17.87■□□□□ 0.45
NPAS3-203ENST00000357798 A8MWV9 139 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 GNRH2O43555 120 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 CFC1BP0CG36 223 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 CFC1P0CG37 223 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 ARL3P36405 182 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 XGP55808 180 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 LINC00315P59091 139 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 C10orf126Q8N4M7 172 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 TIMM17AQ99595 171 aa17.86■□□□□ 0.45
NPAS3-203ENST00000357798 TRAV26-1A0A087WT03 109 aa17.85■□□□□ 0.45
NPAS3-203ENST00000357798 ATMQ13315 3056 aa17.85■□□□□ 0.45
NPAS3-203ENST00000357798 POLR2KP53803 58 aaKnown RBP17.85■□□□□ 0.45
NPAS3-203ENST00000357798 C19orf54Q5BKX5 351 aa17.85■□□□□ 0.45
NPAS3-203ENST00000357798 ABCA4P78363 2273 aa17.85■□□□□ 0.45
NPAS3-203ENST00000357798 TRAV41A0A0B4J266 112 aa17.84■□□□□ 0.45
NPAS3-203ENST00000357798 TSPEAR-AS2P59090 65 aa17.84■□□□□ 0.45
NPAS3-203ENST00000357798 Q6ZS46 218 aa17.84■□□□□ 0.45
NPAS3-203ENST00000357798 NDUFA4O00483 81 aa17.83■□□□□ 0.45
NPAS3-203ENST00000357798 LRBAP50851 2863 aa17.83■□□□□ 0.44
NPAS3-203ENST00000357798 EMP1P54849 157 aa17.83■□□□□ 0.44
NPAS3-203ENST00000357798 VCYO14598 125 aa17.82■□□□□ 0.44
NPAS3-203ENST00000357798 ZNF688P0C7X2 276 aa17.82■□□□□ 0.44
NPAS3-203ENST00000357798 CRIP2P52943 208 aaPredicted RBP17.82■□□□□ 0.44
NPAS3-203ENST00000357798 UNQ9165/PRO28630Q6UXU0 137 aa17.82■□□□□ 0.44
NPAS3-203ENST00000357798 PRO1854Q9UHT4 67 aa17.82■□□□□ 0.44
NPAS3-203ENST00000357798 CSMD1Q96PZ7 3565 aa17.82■□□□□ 0.44
NPAS3-203ENST00000357798 DEFB1P60022 68 aa17.82■□□□□ 0.44
NPAS3-203ENST00000357798 CCL21O00585 134 aa17.81■□□□□ 0.44
NPAS3-203ENST00000357798 KIR2DL4Q99706 377 aa17.81■□□□□ 0.44
NPAS3-203ENST00000357798 AMELXQ99217 191 aa17.81■□□□□ 0.44
NPAS3-203ENST00000357798 ZNF876PQ49A33 203 aa17.8■□□□□ 0.44
NPAS3-203ENST00000357798 NPFFO15130 113 aa17.8■□□□□ 0.44
NPAS3-203ENST00000357798 TMEM170BQ5T4T1 132 aa17.8■□□□□ 0.44
NPAS3-203ENST00000357798 SUMO4Q6EEV6 95 aa17.8■□□□□ 0.44
NPAS3-203ENST00000357798 MUC4Q99102 2169 aa17.8■□□□□ 0.44
NPAS3-203ENST00000357798 M0QXV9 152 aa17.79■□□□□ 0.44
NPAS3-203ENST00000357798 RPL39P62891 51 aaKnown RBP17.79■□□□□ 0.44
NPAS3-203ENST00000357798 CDSNQ15517 529 aa17.79■□□□□ 0.44
NPAS3-203ENST00000357798 ANKRD29Q8N6D5 301 aa17.79■□□□□ 0.44
NPAS3-203ENST00000357798 MOB4Q9Y3A3 225 aa17.79■□□□□ 0.44
NPAS3-203ENST00000357798 SVIPQ8NHG7 77 aa17.79■□□□□ 0.44
NPAS3-203ENST00000357798 J3QQQ9 107 aa17.79■□□□□ 0.44
NPAS3-203ENST00000357798 ZNRF2Q8NHG8 242 aa17.79■□□□□ 0.44
NPAS3-203ENST00000357798 WFDC12Q8WWY7 111 aa17.78■□□□□ 0.44
NPAS3-203ENST00000357798 TMEM262E9PQX1 116 aa17.78■□□□□ 0.44
NPAS3-203ENST00000357798 F6UB75 175 aa17.78■□□□□ 0.44
NPAS3-203ENST00000357798 SCGB1C2P0DMR2 95 aa17.78■□□□□ 0.44
NPAS3-203ENST00000357798 Q5PR19 223 aa17.78■□□□□ 0.44
NPAS3-203ENST00000357798 LGALS3P17931 250 aaKnown RBP17.77■□□□□ 0.43
NPAS3-203ENST00000357798 TRBV12-3P01733 135 aa17.76■□□□□ 0.43
NPAS3-203ENST00000357798 TRBV6-5A0A0K0K1A5 114 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms