RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ATAD5Q96QE3 1844 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 NPYP01303 97 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 NANOS2P60321 138 aaKnown RBP4.5□□□□□ -1.69
BRCA1-203ENST00000357654 FAM30AQ9NZY2 134 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-203ENST00000357654 H3BRN7 92 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 NFE4Q86UQ8 179 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 TNRC6CQ9HCJ0 1690 aaKnown RBP4.5□□□□□ -1.69
BRCA1-203ENST00000357654 C2orf70A6NJV1 201 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 CTRLP40313 264 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 YPEL3P61236 119 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-203ENST00000357654 PDE6HQ13956 83 aa4.5□□□□□ -1.69
BRCA1-203ENST00000357654 JMJD7-PLA2G4BH0Y9G9 81 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 CTSZQ9UBR2 303 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 GREB1LQ9C091 1923 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-203ENST00000357654 TRAV23DV6A0A075B6W5 121 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 CXCL1P09341 107 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 Q6P435 159 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 SLX1AQ9BQ83 275 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 TRBV7-3A0A075B6L6 115 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 ETDBQ3ZM63 59 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 NMSQ5H8A3 153 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 LINC00526Q96FQ7 95 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 DKK2Q9UBU2 259 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 DOCK10Q96BY6 2186 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 TRAV10A0A0B4J240 114 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 TAX1BP3O14907 124 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 CLEC2BQ92478 149 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
BRCA1-203ENST00000357654 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 P0DMU3 169 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 FAM231AP0DMU4 169 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 FAM231CP0DMU5 169 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
BRCA1-203ENST00000357654 TIMM17BO60830 172 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 Q8N1Y9 231 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 ZNF843Q8N446 348 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 DOCK5Q9H7D0 1870 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 C15orf62A8K5M9 175 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 ZNF833PQ6ZTB9 187 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 MCM3APO60318 1980 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 CHD5Q8TDI0 1954 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 BRCA1P38398 1863 aaKnown RBP4.48□□□□□ -1.69
BRCA1-203ENST00000357654 PRO0255Q9UI72 69 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 IGLV3-12A0A075B6K2 115 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 PRSS47A8MTI9 375 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 RP1P56715 2156 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 ARID1AO14497 2285 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 DOPEY2Q9Y3R5 2298 aa4.48□□□□□ -1.69
BRCA1-203ENST00000357654 MRPL55Q7Z7F7 128 aaKnown RBP4.47□□□□□ -1.69
BRCA1-203ENST00000357654 NCOR1O75376 2440 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 PLA2G2EQ9NZK7 142 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 CACNA1IQ9P0X4 2223 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 A6NED7 52 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BKO60814 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 IGLV3-19P01714 112 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BJP06899 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BOP23527 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BBP33778 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BDP58876 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BCP62807 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 RPL39P62891 51 aaKnown RBP4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST2H2BEQ16778 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-203ENST00000357654 LINC00322Q6ZN03 302 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-203ENST00000357654 C10orf105Q8TEF2 133 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BHQ93079 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BNQ99877 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 HIST1H2BMQ99879 126 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 TNRC6BQ9UPQ9 1833 aaKnown RBP4.47□□□□□ -1.69
BRCA1-203ENST00000357654 SIPA1L1O43166 1804 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 C17orf58Q2M2W7 97 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 CEMP1Q6PRD7 247 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-203ENST00000357654 COX6B2Q6YFQ2 88 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 UBR3Q6ZT12 1888 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 LAMA4Q16363 1823 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 A0A0B4J2C4 111 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 H3BUA1 57 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 CFC1BP0CG36 223 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 CFC1P0CG37 223 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 IGLC2P0DOY2 106 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 IGLC3P0DOY3 106 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-203ENST00000357654 CYYR1Q96J86 154 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 A0A0J9YXV3 536 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 Q8N9L7 120 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 SMR3AQ99954 134 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 GFRA4Q9GZZ7 299 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 NDUFA4L2Q9NRX3 87 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 SPANXA1Q9NS26 97 aa4.47□□□□□ -1.69
BRCA1-203ENST00000357654 INSL3P51460 131 aa4.46□□□□□ -1.69
BRCA1-203ENST00000357654 ADORA2A-AS1P86434 159 aa4.46□□□□□ -1.69
BRCA1-203ENST00000357654 ESRGQ1W209 222 aa4.46□□□□□ -1.69
BRCA1-203ENST00000357654 OXLD1Q5BKU9 147 aa4.46□□□□□ -1.69
BRCA1-203ENST00000357654 POM121L12Q8N7R1 296 aa4.46□□□□□ -1.69
BRCA1-203ENST00000357654 TCL1BO95988 128 aa4.46□□□□□ -1.7
BRCA1-203ENST00000357654 PRLHP81277 87 aa4.46□□□□□ -1.7
BRCA1-203ENST00000357654 C1orf137Q5JT78 98 aa4.46□□□□□ -1.7
BRCA1-203ENST00000357654 FOCADQ5VW36 1801 aa4.46□□□□□ -1.7
BRCA1-203ENST00000357654 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms