RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 COL9A2Q14055 689 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-202ENST00000357162 ITLN2Q8WWU7 325 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-202ENST00000357162 IGHV1-18A0A0C4DH31 117 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 ELANEP08246 267 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 C9orf106Q8NAJ2 232 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 CFHR4Q92496 578 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 RNF183Q96D59 192 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 TIMM17BO60830 172 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 CYYR1Q96J86 154 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 IGKV1-16P04430 117 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 C7orf69Q9H7B7 122 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 RNASE8Q8TDE3 154 aaKnown RBP5.22□□□□□ -1.57
VPS13B-202ENST00000357162 M0QXV9 152 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 CRLF1O75462 422 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 IGKV3-7A0A075B6H7 116 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 NDUFC2-KCTD14E9PQ53 114 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 CD33P20138 364 aa5.22□□□□□ -1.57
VPS13B-202ENST00000357162 PRR30Q53SZ7 412 aaPredicted RBP5.21□□□□□ -1.57
VPS13B-202ENST00000357162 LINC00479Q96M42 142 aa5.21□□□□□ -1.57
VPS13B-202ENST00000357162 CEACAM8P31997 349 aaPredicted RBP5.21□□□□□ -1.57
VPS13B-202ENST00000357162 BMPERQ8N8U9 685 aa5.21□□□□□ -1.57
VPS13B-202ENST00000357162 NPBQ8NG41 125 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 C10orf105Q8TEF2 133 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 RHPN1-AS1Q9BWJ2 59 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 FAM236AA0A1B0GUQ0 79 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 FAM236BA0A1B0GV22 79 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 TMEM256-PLSCR3K7ERE1 68 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 BAALC-AS2P0C853 105 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 TOMM6Q96B49 74 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 LTBP2Q14767 1821 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 TRBV10-1A0A0K0K1A3 114 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 FDCSPQ8NFU4 85 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 WT1-ASQ06250 92 aa5.21□□□□□ -1.58
VPS13B-202ENST00000357162 IGHV3OR16-13A0A075B7E8 117 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 IGHV3-74A0A0B4J1X5 117 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 FGFBP3Q8TAT2 258 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 PRSS29PA6NIE9 313 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 IGKV1-39P01597 117 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 IGKV1D-39P04432 117 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 RBX1P62877 108 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 CENPFP49454 3210 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 TCF15Q12870 199 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 Q8TAT8 98 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 H7C423 109 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 PIK3CD-AS1Q5SR53 167 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 C11orf1Q9H5F2 150 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 IGHV1-58A0A0C4DH39 117 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 A0A0G2JRQ6 117 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 ODF1Q14990 250 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 ZFP2Q6ZN57 461 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 C9orf47Q6ZRZ4 202 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 TMEM89A2RUT3 159 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 K7EN84 100 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 NDUFA11Q86Y39 141 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 TRAV3A0A0B4J244 114 aa5.2□□□□□ -1.58
VPS13B-202ENST00000357162 TNRC6BQ9UPQ9 1833 aaKnown RBP5.2□□□□□ -1.58
VPS13B-202ENST00000357162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-202ENST00000357162 NDUFA7O95182 113 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 TGFAP01135 160 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 FAM222AQ5U5X8 452 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 TRGV1A0A0A0MS02 117 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 CELA3AP09093 270 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 UBE2BP63146 152 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 NKAPP1Q8N9T2 125 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 C19orf71A6NCJ1 209 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 MCRIP2Q9BUT9 160 aaKnown RBP5.19□□□□□ -1.58
VPS13B-202ENST00000357162 NSD1Q96L73 2696 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-202ENST00000357162 LHBP01229 141 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 TRAV13-1A0A0B4J241 112 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 IGF2-ASQ6U949 168 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 C10orf55Q5SWW7 151 aa5.19□□□□□ -1.58
VPS13B-202ENST00000357162 NTN5Q8WTR8 489 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-202ENST00000357162 ZNF672Q499Z4 452 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-202ENST00000357162 VWCEQ96DN2 955 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 A0A1B0GX51 115 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 K7EMT4 169 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 TMEM213A2RRL7 107 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 MORN5Q5VZ52 161 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 LRRC75A-AS1Q8N1F1 130 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 NAA38Q9BRA0 125 aaKnown RBP5.18□□□□□ -1.58
VPS13B-202ENST00000357162 SPRR3Q9UBC9 169 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 C2orf70A6NJV1 201 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 FOXC1Q12948 553 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 CNFNQ9BYD5 112 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 LOXL1Q08397 574 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-202ENST00000357162 PCP2Q8IVA1 136 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 TRBV30A0A0K0K1B3 111 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 TRAV25A0A0B4J276 109 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 FAM167A-AS1Q96KT0 104 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 YPEL4Q96NS1 127 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 THSD7BQ9C0I4 1608 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 MDFICQ9P1T7 246 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 LGALS9O00182 355 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 PTH2Q96A98 100 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 C20orf173Q96LM9 149 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 COL4A6Q14031 1691 aa5.18□□□□□ -1.58
VPS13B-202ENST00000357162 IGKV3OR2-268A0A0C4DH90 116 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 IGKV1-17P01599 117 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 IGHV3OR16-12A0A075B7B8 117 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 A0A1B0GUS0 222 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms