RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 TM4SF20Q53R12 229 aa13.37□□□□□ -0.27
GYPC-202ENST00000356887 DOPEY1Q5JWR5 2465 aa13.37□□□□□ -0.27
GYPC-202ENST00000356887 A0A1W2PPM0 123 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 GCSHP23434 173 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 FXYD2P54710 66 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 DEFB1P60022 68 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 LY6EQ16553 131 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 RASL10AQ92737 203 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 MRPL16Q9NX20 251 aaKnown RBP13.36□□□□□ -0.27
GYPC-202ENST00000356887 SPRY2O43597 315 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 ANXA2RQ3ZCQ2 193 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 AKAP6Q13023 2319 aa13.36□□□□□ -0.27
GYPC-202ENST00000356887 A6NDX4 124 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 M0R381 172 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 IGHV3-11P01762 117 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 MED14OSP0DP75 135 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 ASIPP42127 132 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 APRG1Q8IVJ8 170 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 MAPKAPK5-AS1Q8N8E1 139 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 C20orf78Q9BR46 151 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 PIMREGQ9BSJ6 248 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 DPH3P1Q9H4G8 78 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 SPTAN1Q13813 2472 aaKnown RBP13.35□□□□□ -0.27
GYPC-202ENST00000356887 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
GYPC-202ENST00000356887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.35□□□□□ -0.27
GYPC-202ENST00000356887 S100A4P26447 101 aaKnown RBP13.35□□□□□ -0.27
GYPC-202ENST00000356887 PLNP26678 52 aa13.34□□□□□ -0.27
GYPC-202ENST00000356887 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
GYPC-202ENST00000356887 SUMO2P61956 95 aaKnown RBP13.34□□□□□ -0.27
GYPC-202ENST00000356887 ORMDL2Q53FV1 153 aa13.34□□□□□ -0.27
GYPC-202ENST00000356887 TM2D2Q9BX73 214 aa13.34□□□□□ -0.27
GYPC-202ENST00000356887 C14orf178Q8N769 122 aaPredicted RBP13.33□□□□□ -0.27
GYPC-202ENST00000356887 C10orf105Q8TEF2 133 aa13.33□□□□□ -0.27
GYPC-202ENST00000356887 TOMM6Q96B49 74 aa13.33□□□□□ -0.27
GYPC-202ENST00000356887 PHLDA3Q9Y5J5 127 aa13.33□□□□□ -0.27
GYPC-202ENST00000356887 FAM208BQ5VWN6 2430 aa13.33□□□□□ -0.28
GYPC-202ENST00000356887 TRBV7-9A0A0J9YWB2 115 aa13.33□□□□□ -0.28
GYPC-202ENST00000356887 F6UB75 175 aa13.33□□□□□ -0.28
GYPC-202ENST00000356887 H3BUX3 64 aa13.33□□□□□ -0.28
GYPC-202ENST00000356887 H7C1H1 209 aa13.33□□□□□ -0.28
GYPC-202ENST00000356887 RNF223E7ERA6 249 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 PF4V1P10720 104 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 SLC25A16P16260 332 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 RPL11P62913 178 aaKnown RBP13.32□□□□□ -0.28
GYPC-202ENST00000356887 BLCAPP62952 87 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 SAMD5Q5TGI4 173 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 CEND1Q8N111 149 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 PHLDA1Q8WV24 401 aaPredicted RBP13.32□□□□□ -0.28
GYPC-202ENST00000356887 RPL39LQ96EH5 51 aaKnown RBP13.32□□□□□ -0.28
GYPC-202ENST00000356887 SPCS1Q9Y6A9 102 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 COL12A1Q99715 3063 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 F8VRH5 84 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 K7EMI3 77 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 GNRH2O43555 120 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 SCGB3A1Q96QR1 104 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 RHPN1-AS1Q9BWJ2 59 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 TNFRSF18Q9Y5U5 241 aa13.32□□□□□ -0.28
GYPC-202ENST00000356887 IGLV1-40P01703 118 aa13.31□□□□□ -0.28
GYPC-202ENST00000356887 FABP2P12104 132 aa13.31□□□□□ -0.28
GYPC-202ENST00000356887 RNASE3P12724 160 aaKnown RBP13.31□□□□□ -0.28
GYPC-202ENST00000356887 Q6ZS46 218 aa13.31□□□□□ -0.28
GYPC-202ENST00000356887 SPXQ9BT56 116 aa13.31□□□□□ -0.28
GYPC-202ENST00000356887 CHD6Q8TD26 2715 aa13.31□□□□□ -0.28
GYPC-202ENST00000356887 ZNF418Q8TF45 676 aaPredicted RBP13.3□□□□□ -0.28
GYPC-202ENST00000356887 SELENOKQ9Y6D0 94 aa13.3□□□□□ -0.28
GYPC-202ENST00000356887 UBR5O95071 2799 aaPredicted RBP13.3□□□□□ -0.28
GYPC-202ENST00000356887 TAL2Q16559 108 aa13.3□□□□□ -0.28
GYPC-202ENST00000356887 LCNL1Q6ZST4 164 aa13.3□□□□□ -0.28
GYPC-202ENST00000356887 POM121L12Q8N7R1 296 aa13.3□□□□□ -0.28
GYPC-202ENST00000356887 NEXN-AS1Q8NBZ9 246 aa13.3□□□□□ -0.28
GYPC-202ENST00000356887 TSSC4Q9Y5U2 329 aaPredicted RBP13.3□□□□□ -0.28
GYPC-202ENST00000356887 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
GYPC-202ENST00000356887 MGPP08493 103 aa13.29□□□□□ -0.28
GYPC-202ENST00000356887 CCL19Q99731 98 aa13.29□□□□□ -0.28
GYPC-202ENST00000356887 TEX48A0A1B0GUV7 120 aa13.28□□□□□ -0.28
GYPC-202ENST00000356887 K7ERJ3 54 aa13.28□□□□□ -0.28
GYPC-202ENST00000356887 NXPH4O95158 308 aa13.28□□□□□ -0.28
GYPC-202ENST00000356887 RAX2Q96IS3 184 aa13.28□□□□□ -0.28
GYPC-202ENST00000356887 DAZ1Q9NQZ3 744 aaKnown RBP13.28□□□□□ -0.28
GYPC-202ENST00000356887 CFHR3Q02985 330 aa13.27□□□□□ -0.28
GYPC-202ENST00000356887 NHP2Q9NX24 153 aaKnown RBP13.27□□□□□ -0.28
GYPC-202ENST00000356887 PPP1R17O96001 155 aa13.27□□□□□ -0.29
GYPC-202ENST00000356887 C2orf66Q6UXQ4 117 aa13.27□□□□□ -0.29
GYPC-202ENST00000356887 KIF25-AS1Q9Y6Z4 181 aa13.27□□□□□ -0.29
GYPC-202ENST00000356887 ZFHX3Q15911 3703 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 IGHV4-30-2A0A087WSY4 118 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 KLLNB2CW77 178 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 K7EMT4 169 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 LINC00315P59091 139 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 HERV-K104P63124 156 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 RPL24P83731 157 aaKnown RBP13.26□□□□□ -0.29
GYPC-202ENST00000356887 BAALCQ8WXS3 180 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 ERG28Q9UKR5 140 aa13.26□□□□□ -0.29
GYPC-202ENST00000356887 SRD5A1P18405 259 aa13.25□□□□□ -0.29
GYPC-202ENST00000356887 GAGE5Q13069 117 aa13.25□□□□□ -0.29
GYPC-202ENST00000356887 GAGE6Q13070 117 aa13.25□□□□□ -0.29
GYPC-202ENST00000356887 SPANXA1Q9NS26 97 aa13.25□□□□□ -0.29
GYPC-202ENST00000356887 LINC01619G3V211 115 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms