RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 F8W1H4 67 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 DAZAP2Q15038 168 aaPredicted RBP4.33□□□□□ -1.72
PTPRD-202ENST00000356435 KIAA1671Q9BY89 1806 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 TNRC6AQ8NDV7 1962 aaKnown RBP4.33□□□□□ -1.72
PTPRD-202ENST00000356435 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 Q6ZRM9 215 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 CEND1Q8N111 149 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 WFDC9Q8NEX5 89 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 IGHV4-28A0A0C4DH34 117 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 F6UB75 175 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 LGALS9BQ3B8N2 356 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 LGALS9CQ6DKI2 356 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 RNASE8Q8TDE3 154 aaKnown RBP4.33□□□□□ -1.72
PTPRD-202ENST00000356435 FXYD5Q96DB9 178 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 GTSF1LQ9H1H1 148 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 SNRNP200O75643 2136 aaKnown RBP4.33□□□□□ -1.72
PTPRD-202ENST00000356435 IFITM1P13164 125 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
PTPRD-202ENST00000356435 CENPVL3A0A0U1RRI6 287 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 K7EP34 96 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 SPRY2O43597 315 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 GPHB5Q86YW7 130 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 BAALCQ8WXS3 180 aa4.33□□□□□ -1.72
PTPRD-202ENST00000356435 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
PTPRD-202ENST00000356435 A0A1B0GX51 115 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 NCR3O14931 201 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 ODF3L1Q8IXM7 274 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 DEFB125Q8N687 156 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 C9orf118A6NHY6 69 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 H0YGX0 51 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 CCL25O15444 150 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 GNRH2O43555 120 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 PLA2G5P39877 138 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 NDUFA11Q86Y39 141 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 FRMPD3Q5JV73 1810 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 LINC01620Q4KN68 170 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 RNF144BQ7Z419 303 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 IGLC7A0M8Q6 106 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 GRNP28799 593 aaKnown RBP4.32□□□□□ -1.72
PTPRD-202ENST00000356435 HIST2H2BCQ6DN03 193 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 DIAPH2-AS1Q14236 149 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 KRTAP27-1Q3LI81 207 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 COL6A6A6NMZ7 2263 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 CRIP3Q6Q6R5 217 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 KLHDC3Q9BQ90 382 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 C11orf45Q8TAV5 145 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 HHLA3Q9XRX5 114 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 V9GYV3 84 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 IGHV4OR15-8A0A075B7B6 117 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 A0A087WW49 117 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 HILS1P60008 231 aa4.32□□□□□ -1.72
PTPRD-202ENST00000356435 ACYP1P07311 99 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 C5orf38Q86SI9 138 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 LRRC75A-AS1Q8N1F1 130 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 ANKRD29Q8N6D5 301 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 ZNF491Q8N8L2 437 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 CYYR1Q96J86 154 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 AMTNQ6UX39 209 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 SPATA25Q9BR10 227 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 CACNA1HO95180 2353 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 PROP1O75360 226 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 PROK2Q9HC23 129 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-202ENST00000356435 BAALC-AS2P0C853 105 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 COX8AP10176 69 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 NREPQ16612 68 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 AGPAT4-IT1Q9H0P7 198 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 PLXNB3Q9ULL4 1909 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 ZNF503-AS2A6NEH8 195 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 AJUBAQ96IF1 538 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 TICRRQ7Z2Z1 1910 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 SIVA1O15304 175 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 P0C879 139 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 SND1-IT1Q9HBX3 110 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 C14orf132Q9NPU4 83 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 CTSZQ9UBR2 303 aa4.31□□□□□ -1.72
PTPRD-202ENST00000356435 ABCA7Q8IZY2 2146 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 C2orf70A6NJV1 201 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 RBM3P98179 157 aaKnown RBP4.3□□□□□ -1.72
PTPRD-202ENST00000356435 POU2AF1Q16633 256 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 ZNF524Q96C55 264 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 DOCK3Q8IZD9 2030 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 MYOFQ9NZM1 2061 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 IGHV7-81A0A0B4J1V7 117 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 CFC1BP0CG36 223 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 CFC1P0CG37 223 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 C5orf56Q8N8D9 126 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 TRBV7-3A0A075B6L6 115 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 H0Y9J4 135 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 SPAG11BQ08648 103 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 DIRC1Q969H9 104 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 TANC2Q9HCD6 1990 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 NDUFS7O75251 213 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 CRYBA4P53673 196 aa4.3□□□□□ -1.72
PTPRD-202ENST00000356435 RSPO1Q2MKA7 263 aaPredicted RBP4.3□□□□□ -1.72
PTPRD-202ENST00000356435 ZNF295-AS1Q8N0V1 137 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 219.4 ms