RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 CBY3A6NI87 242 aa16.29■□□□□ 0.2
LIMS2-202ENST00000355119 UBE2E2Q96LR5 201 aa16.29■□□□□ 0.2
LIMS2-202ENST00000355119 SYNJ2BPP57105 145 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 ADAMTSL5Q6ZMM2 481 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 TOMM6Q96B49 74 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 ACACBO00763 2458 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 IGHV4OR15-8A0A075B7B6 117 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 A0A087WW49 117 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 TRAV12-1A0A0B4J245 112 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 TRAV12-3A0A0B4J271 114 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 HLA-DRB4P13762 266 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 LRRC75A-AS1Q8N1F1 130 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 RNF152Q8N8N0 203 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 MRPL35Q9NZE8 188 aaKnown RBP16.28■□□□□ 0.2
LIMS2-202ENST00000355119 KIF25-AS1Q9Y6Z4 181 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 HLA-DRB4X5D2U9 266 aa16.28■□□□□ 0.2
LIMS2-202ENST00000355119 A6NDN8 102 aa16.27■□□□□ 0.2
LIMS2-202ENST00000355119 DEFB113Q30KQ7 82 aa16.27■□□□□ 0.2
LIMS2-202ENST00000355119 TMEM160Q9NX00 188 aa16.27■□□□□ 0.2
LIMS2-202ENST00000355119 HOXA3O43365 443 aaPredicted RBP16.26■□□□□ 0.19
LIMS2-202ENST00000355119 PLNP26678 52 aa16.26■□□□□ 0.19
LIMS2-202ENST00000355119 SCGB3A1Q96QR1 104 aa16.26■□□□□ 0.19
LIMS2-202ENST00000355119 CD7P09564 240 aa16.26■□□□□ 0.19
LIMS2-202ENST00000355119 ZC2HC1BQ5TFG8 222 aa16.26■□□□□ 0.19
LIMS2-202ENST00000355119 HIGD1BQ9P298 99 aa16.26■□□□□ 0.19
LIMS2-202ENST00000355119 IGKV2D-26A0A0A0MRZ7 120 aa16.25■□□□□ 0.19
LIMS2-202ENST00000355119 DUSP14O95147 198 aaKnown RBP16.25■□□□□ 0.19
LIMS2-202ENST00000355119 HOXD3P31249 432 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-202ENST00000355119 RPL32P62910 135 aaKnown RBP16.25■□□□□ 0.19
LIMS2-202ENST00000355119 GTSCR1Q86UQ5 136 aa16.25■□□□□ 0.19
LIMS2-202ENST00000355119 WFDC12Q8WWY7 111 aa16.25■□□□□ 0.19
LIMS2-202ENST00000355119 USP9XQ93008 2570 aaPredicted RBP16.25■□□□□ 0.19
LIMS2-202ENST00000355119 H7C1H1 209 aa16.24■□□□□ 0.19
LIMS2-202ENST00000355119 LINC00315P59091 139 aa16.24■□□□□ 0.19
LIMS2-202ENST00000355119 Q5PR19 223 aa16.24■□□□□ 0.19
LIMS2-202ENST00000355119 KRTAP10-9P60411 292 aa16.24■□□□□ 0.19
LIMS2-202ENST00000355119 CSTL1Q9H114 145 aa16.24■□□□□ 0.19
LIMS2-202ENST00000355119 SPG11Q96JI7 2443 aa16.23■□□□□ 0.19
LIMS2-202ENST00000355119 H3BRM9 83 aa16.23■□□□□ 0.19
LIMS2-202ENST00000355119 ERASQ7Z444 233 aa16.23■□□□□ 0.19
LIMS2-202ENST00000355119 OR4C5Q8NGB2 326 aa16.23■□□□□ 0.19
LIMS2-202ENST00000355119 C9orf85Q96MD7 179 aa16.23■□□□□ 0.19
LIMS2-202ENST00000355119 COL12A1Q99715 3063 aa16.22■□□□□ 0.19
LIMS2-202ENST00000355119 IGHV3-16A0A0C4DH30 117 aa16.22■□□□□ 0.19
LIMS2-202ENST00000355119 F8VRH5 84 aa16.22■□□□□ 0.19
LIMS2-202ENST00000355119 CDKN1BP46527 198 aa16.21■□□□□ 0.19
LIMS2-202ENST00000355119 C2orf66Q6UXQ4 117 aa16.21■□□□□ 0.19
LIMS2-202ENST00000355119 IGKV3-20P01619 116 aa16.21■□□□□ 0.18
LIMS2-202ENST00000355119 FOSL1P15407 271 aa16.21■□□□□ 0.18
LIMS2-202ENST00000355119 FOXI2Q6ZQN5 318 aa16.21■□□□□ 0.18
LIMS2-202ENST00000355119 Q8N2B8 174 aa16.21■□□□□ 0.18
LIMS2-202ENST00000355119 SYT8Q8NBV8 401 aa16.21■□□□□ 0.18
LIMS2-202ENST00000355119 CHTOPQ9Y3Y2 248 aaKnown RBP16.21■□□□□ 0.18
LIMS2-202ENST00000355119 AMMECR1LQ6DCA0 310 aa16.2■□□□□ 0.18
LIMS2-202ENST00000355119 SUMO4Q6EEV6 95 aa16.2■□□□□ 0.18
LIMS2-202ENST00000355119 NEXN-AS1Q8NBZ9 246 aa16.2■□□□□ 0.18
LIMS2-202ENST00000355119 DUX5Q96PT3 197 aa16.2■□□□□ 0.18
LIMS2-202ENST00000355119 ZFHX3Q15911 3703 aa16.2■□□□□ 0.18
LIMS2-202ENST00000355119 CELSR1Q9NYQ6 3014 aa16.19■□□□□ 0.18
LIMS2-202ENST00000355119 CR1P17927 2039 aa16.19■□□□□ 0.18
LIMS2-202ENST00000355119 IGHV1OR15-1A0A075B7D0 117 aa16.19■□□□□ 0.18
LIMS2-202ENST00000355119 LINC01549A6NIU2 74 aa16.19■□□□□ 0.18
LIMS2-202ENST00000355119 FLNCQ14315 2725 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 TRAV12-2A0A075B6T6 113 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 TCTEX1D4Q5JR98 221 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 Q96MF0 132 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 JPT2Q9H910 190 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 VPS13CQ709C8 3753 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 TRAV8-6A0A0B4J262 113 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 C9orf118A6NHY6 69 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 SPINK13Q1W4C9 94 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 CHAC1Q9BUX1 264 aa16.18■□□□□ 0.18
LIMS2-202ENST00000355119 MUC4Q99102 2169 aa16.17■□□□□ 0.18
LIMS2-202ENST00000355119 A0A087WWL8 130 aa16.17■□□□□ 0.18
LIMS2-202ENST00000355119 F5H697 171 aa16.17■□□□□ 0.18
LIMS2-202ENST00000355119 POLR2KP53803 58 aaKnown RBP16.17■□□□□ 0.18
LIMS2-202ENST00000355119 BAALCQ8WXS3 180 aa16.17■□□□□ 0.18
LIMS2-202ENST00000355119 TTTY13Q9BZ97 58 aa16.17■□□□□ 0.18
LIMS2-202ENST00000355119 TRBV25-1A0A075B6N4 114 aa16.16■□□□□ 0.18
LIMS2-202ENST00000355119 VCYO14598 125 aa16.16■□□□□ 0.18
LIMS2-202ENST00000355119 Q8N1Y9 231 aa16.16■□□□□ 0.18
LIMS2-202ENST00000355119 MDFICQ9P1T7 246 aa16.16■□□□□ 0.18
LIMS2-202ENST00000355119 USP24Q9UPU5 2620 aa16.16■□□□□ 0.18
LIMS2-202ENST00000355119 CYSLTR1Q9Y271 337 aa16.16■□□□□ 0.18
LIMS2-202ENST00000355119 TRBV6-5A0A0K0K1A5 114 aa16.15■□□□□ 0.18
LIMS2-202ENST00000355119 AMTNQ6UX39 209 aa16.15■□□□□ 0.18
LIMS2-202ENST00000355119 CSPG4Q6UVK1 2322 aa16.15■□□□□ 0.18
LIMS2-202ENST00000355119 K7EP13 123 aa16.14■□□□□ 0.17
LIMS2-202ENST00000355119 SLURP1P55000 103 aa16.14■□□□□ 0.17
LIMS2-202ENST00000355119 NEGR1Q7Z3B1 354 aa16.14■□□□□ 0.17
LIMS2-202ENST00000355119 TRGV11A0A075B6L2 103 aa16.14■□□□□ 0.17
LIMS2-202ENST00000355119 KIR2DL4Q99706 377 aa16.14■□□□□ 0.17
LIMS2-202ENST00000355119 LINC01619G3V211 115 aa16.13■□□□□ 0.17
LIMS2-202ENST00000355119 ZFP2Q6ZN57 461 aa16.13■□□□□ 0.17
LIMS2-202ENST00000355119 PRRC2AP48634 2157 aaKnown RBP16.13■□□□□ 0.17
LIMS2-202ENST00000355119 TRAV2A0A0B4J234 112 aa16.12■□□□□ 0.17
LIMS2-202ENST00000355119 PRSS29PA6NIE9 313 aa16.12■□□□□ 0.17
LIMS2-202ENST00000355119 GCSHP23434 173 aa16.12■□□□□ 0.17
LIMS2-202ENST00000355119 MAPKAPK5-AS1Q8N8E1 139 aa16.12■□□□□ 0.17
LIMS2-202ENST00000355119 PEMTQ9UBM1 199 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms