RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 SEC11AP67812 179 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 HIST1H4GQ99525 98 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 FLNAP21333 2647 aaKnown RBP9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 TMEM238C9JI98 176 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 DMXL1Q9Y485 3027 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 INSP01308 110 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 PPBPP02775 128 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 PAX2Q02962 417 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 SIGMAR1Q99720 223 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 ASPMQ8IZT6 3477 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 MAST4O15021 2626 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 OR11H2Q8NH07 326 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 ATMQ13315 3056 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 NBEAQ8NFP9 2946 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 A0A1B0GWB2 263 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 K7EP13 123 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 DPH3P1Q9H4G8 78 aa9.52□□□□□ -0.89
PCDHB11-201ENST00000354757 ITPR3Q14573 2671 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 ESDP10768 282 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 PLA2G2AP14555 144 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 PSMB2P49721 201 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 NXT2Q9NPJ8 142 aaKnown RBP9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 SAMD5Q5TGI4 173 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 MTURNQ8N3F0 131 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 MGAM2Q2M2H8 2515 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 ATP5LO75964 103 aa9.51□□□□□ -0.89
PCDHB11-201ENST00000354757 ZNF415Q09FC8 603 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 PPP1R17O96001 155 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 SRSF1Q07955 248 aaKnown RBP eCLIP9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 CYSLTR1Q9Y271 337 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 LTAP01374 205 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 TMEM61Q8N0U2 210 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 TMEM158Q8WZ71 300 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 ZNF492Q9P255 531 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 ZZEF1O43149 2961 aa9.5□□□□□ -0.89
PCDHB11-201ENST00000354757 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 H3BUA1 57 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 CRYGBP07316 175 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 VCX2Q9H322 139 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 TSSC4Q9Y5U2 329 aaPredicted RBP9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 ADGRG4Q8IZF6 3080 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 IGHV3-38A0A0C4DH36 116 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 INS-IGF2F8WCM5 200 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 GAGE7O76087 117 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 GAGE12FP0CL80 117 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 GAGE12GP0CL81 117 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 GAGE12IP0CL82 117 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 LGALS3P17931 250 aaKnown RBP9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 OR9G4Q8NGQ1 327 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 TAX1BP3O14907 124 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 TNFRSF6BO95407 300 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 GATA1P15976 413 aaPredicted RBP9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 DEFB125Q8N687 156 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 WI2-2373I1.2A0A1W2PRP0 233 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 MEIG1Q5JSS6 88 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
PCDHB11-201ENST00000354757 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 C2orf70A6NJV1 201 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 HSD52Q0P140 79 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 LINC00310P59036 64 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 CD28P10747 220 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 MRPL51Q4U2R6 128 aaKnown RBP9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 FAM104BQ5XKR9 115 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 FAM231DQ6ZW35 169 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 OR5A1Q8NGJ0 315 aa9.48□□□□□ -0.89
PCDHB11-201ENST00000354757 DLX4Q92988 240 aaPredicted RBP9.47□□□□□ -0.89
PCDHB11-201ENST00000354757 MRPL16Q9NX20 251 aaKnown RBP9.47□□□□□ -0.89
PCDHB11-201ENST00000354757 FSTL3O95633 263 aa9.47□□□□□ -0.89
PCDHB11-201ENST00000354757 C16orf54Q6UWD8 224 aa9.47□□□□□ -0.89
PCDHB11-201ENST00000354757 C1orf159Q96HA4 380 aa9.47□□□□□ -0.89
PCDHB11-201ENST00000354757 CFAP47Q6ZTR5 3102 aa9.47□□□□□ -0.89
PCDHB11-201ENST00000354757 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
PCDHB11-201ENST00000354757 A0A096LPF7 62 aa9.46□□□□□ -0.89
PCDHB11-201ENST00000354757 CTRLP40313 264 aa9.46□□□□□ -0.89
PCDHB11-201ENST00000354757 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.89
PCDHB11-201ENST00000354757 NPYP01303 97 aa9.46□□□□□ -0.89
PCDHB11-201ENST00000354757 LAGE3Q14657 143 aa9.46□□□□□ -0.89
PCDHB11-201ENST00000354757 MRAPQ8TCY5 172 aa9.46□□□□□ -0.9
PCDHB11-201ENST00000354757 LOC400499M0QZD8 3231 aa9.46□□□□□ -0.9
PCDHB11-201ENST00000354757 COL12A1Q99715 3063 aa9.46□□□□□ -0.9
PCDHB11-201ENST00000354757 GAGE12JA6NER3 117 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 GAGE4Q13068 117 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 GAGE5Q13069 117 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 GAGE13Q4V321 117 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 C1QTNF4Q9BXJ3 329 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 EBI3Q14213 229 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 ORMDL2Q53FV1 153 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 Q6YL49 198 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms