RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 NCBP2LA6PVI3 153 aaKnown RBP7.79□□□□□ -1.16
SYNE1-203ENST00000354674 DEFB112Q30KQ8 113 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 KLK15Q9H2R5 256 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 HECTD1Q9ULT8 2610 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 IGHV7-81A0A0B4J1V7 117 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 ZNF688P0C7X2 276 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 RPL7P18124 248 aaKnown RBP7.79□□□□□ -1.16
SYNE1-203ENST00000354674 ATP5L2Q7Z4Y8 100 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 DLX4Q92988 240 aaPredicted RBP7.79□□□□□ -1.16
SYNE1-203ENST00000354674 EPDR1Q9UM22 224 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 MOB4Q9Y3A3 225 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 HOXA3O43365 443 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-203ENST00000354674 EGR2P11161 476 aaPredicted RBP7.78□□□□□ -1.16
SYNE1-203ENST00000354674 LGALS9BQ3B8N2 356 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 LGALS9CQ6DKI2 356 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 EXOC3-AS1Q8N2X6 119 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 OR1L4Q8NGR5 311 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 A0A1B0GUT8 65 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 NDPQ00604 133 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 GOLT1AQ6ZVE7 132 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
SYNE1-203ENST00000354674 H3BUX3 64 aa7.77□□□□□ -1.16
SYNE1-203ENST00000354674 HBDP02042 147 aa7.77□□□□□ -1.16
SYNE1-203ENST00000354674 Q6YL49 198 aa7.77□□□□□ -1.16
SYNE1-203ENST00000354674 PPDPFLQ8WWR9 84 aa7.77□□□□□ -1.16
SYNE1-203ENST00000354674 FAM167A-AS1Q96KT0 104 aa7.77□□□□□ -1.16
SYNE1-203ENST00000354674 RASL11BQ9BPW5 248 aa7.77□□□□□ -1.16
SYNE1-203ENST00000354674 EDA2RQ9HAV5 297 aa7.77□□□□□ -1.16
SYNE1-203ENST00000354674 TEX15Q9BXT5 2789 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-203ENST00000354674 LEPP41159 167 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 SUB1P53999 127 aaKnown RBP eCLIP7.77□□□□□ -1.17
SYNE1-203ENST00000354674 EMP1P54849 157 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 KLK9Q2XQG4 91 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 MORN3Q6PF18 240 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-203ENST00000354674 KLK9Q9UKQ9 250 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 RHODO00212 210 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 NPYP01303 97 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 CRIP2P52943 208 aaPredicted RBP7.77□□□□□ -1.17
SYNE1-203ENST00000354674 FAM231DQ6ZW35 169 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 LINC00305Q7Z4B0 112 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
SYNE1-203ENST00000354674 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
SYNE1-203ENST00000354674 CKS2P33552 79 aa7.76□□□□□ -1.17
SYNE1-203ENST00000354674 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
SYNE1-203ENST00000354674 RAX2Q96IS3 184 aa7.76□□□□□ -1.17
SYNE1-203ENST00000354674 HHLA3Q9XRX5 114 aa7.76□□□□□ -1.17
SYNE1-203ENST00000354674 CD69Q07108 199 aa7.76□□□□□ -1.17
SYNE1-203ENST00000354674 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
SYNE1-203ENST00000354674 OTOGQ6ZRI0 2925 aa7.76□□□□□ -1.17
SYNE1-203ENST00000354674 WI2-2373I1.2A0A1W2PRP0 233 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 TMEM262E9PQX1 116 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 IGKCP01834 107 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 MRPL35Q9NZE8 188 aaKnown RBP7.75□□□□□ -1.17
SYNE1-203ENST00000354674 KLF12Q9Y4X4 402 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 C9JAW5 83 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 TCL1BO95988 128 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 IGHV4-59P01825 116 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 C19orf54Q5BKX5 351 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 TEN1Q86WV5 123 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 A8MWV9 139 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 PATE2Q6UY27 113 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 SCGB1D4Q6XE38 83 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 C15orf53Q8NAA6 179 aa7.75□□□□□ -1.17
SYNE1-203ENST00000354674 CREBBPQ92793 2442 aa7.74□□□□□ -1.17
SYNE1-203ENST00000354674 VCX2Q9H322 139 aa7.74□□□□□ -1.17
SYNE1-203ENST00000354674 C21orf62Q9NYP8 219 aa7.74□□□□□ -1.17
SYNE1-203ENST00000354674 LY6EQ16553 131 aa7.74□□□□□ -1.17
SYNE1-203ENST00000354674 MSRB1Q9NZV6 116 aa7.74□□□□□ -1.17
SYNE1-203ENST00000354674 ZNF580Q9UK33 172 aa7.74□□□□□ -1.17
SYNE1-203ENST00000354674 ATP6V0E1O15342 81 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 IGHG2P01859 326 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 IGF1P05019 195 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 C5orf47Q569G3 176 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 NTN5Q8WTR8 489 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-203ENST00000354674 FXYD5Q96DB9 178 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 AAMDCQ9H7C9 122 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 MRPL36Q9P0J6 103 aaKnown RBP7.73□□□□□ -1.17
SYNE1-203ENST00000354674 MXRA5Q9NR99 2828 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 FLNAP21333 2647 aaKnown RBP7.73□□□□□ -1.17
SYNE1-203ENST00000354674 I3L2K1 104 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 RIGQ13278 110 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 LYZL1Q6UWQ5 148 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 FANCD2OSQ96PS1 177 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 IGLV11-55A0A075B6I3 123 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 TEX49A0A1B0GTD5 131 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 TWIST1Q15672 202 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 FAM19A5Q7Z5A7 132 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-203ENST00000354674 TMEM86BQ8N661 226 aa7.73□□□□□ -1.17
SYNE1-203ENST00000354674 FAM110DQ8TAY7 271 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-203ENST00000354674 SMIM9A6NGZ8 99 aa7.72□□□□□ -1.17
SYNE1-203ENST00000354674 MRPL51Q4U2R6 128 aaKnown RBP7.72□□□□□ -1.17
SYNE1-203ENST00000354674 IL17RELQ6ZVW7 336 aa7.72□□□□□ -1.17
SYNE1-203ENST00000354674 KLHL30-AS1Q8NEE0 82 aa7.72□□□□□ -1.17
SYNE1-203ENST00000354674 ORMDL3Q8N138 153 aa7.72□□□□□ -1.17
SYNE1-203ENST00000354674 THAP8Q8NA92 274 aa7.72□□□□□ -1.17
SYNE1-203ENST00000354674 Q9H3A6 140 aa7.72□□□□□ -1.17
SYNE1-203ENST00000354674 CCDC168Q8NDH2 2452 aa7.72□□□□□ -1.17
SYNE1-203ENST00000354674 K7EIM0 57 aa7.71□□□□□ -1.17
SYNE1-203ENST00000354674 BLCAPP62952 87 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms