RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SUMO2P61956 95 aaKnown RBP14.77□□□□□ -0.05
COL13A1-201ENST00000354547 A6NDX4 124 aa14.76□□□□□ -0.05
COL13A1-201ENST00000354547 USMG5Q96IX5 58 aa14.76□□□□□ -0.05
COL13A1-201ENST00000354547 JPT2Q9H910 190 aa14.76□□□□□ -0.05
COL13A1-201ENST00000354547 GTF2H5Q6ZYL4 71 aa14.76□□□□□ -0.05
COL13A1-201ENST00000354547 MRAP2Q96G30 205 aa14.76□□□□□ -0.05
COL13A1-201ENST00000354547 NHP2Q9NX24 153 aaKnown RBP14.76□□□□□ -0.05
COL13A1-201ENST00000354547 SAP30O75446 220 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 MSMBP08118 114 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 MAPK1IP1LQ8NDC0 245 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 DPH3P1Q9H4G8 78 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 SMPXQ9UHP9 88 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 LENEPQ9Y5L5 61 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 MUC4Q99102 2169 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 A0A087WX48 190 aa14.75□□□□□ -0.05
COL13A1-201ENST00000354547 CRIP2P52943 208 aaPredicted RBP14.75□□□□□ -0.05
COL13A1-201ENST00000354547 SMIM13P0DJ93 91 aa14.74□□□□□ -0.05
COL13A1-201ENST00000354547 CDKN1BP46527 198 aa14.74□□□□□ -0.05
COL13A1-201ENST00000354547 DAZ1Q9NQZ3 744 aaKnown RBP14.74□□□□□ -0.05
COL13A1-201ENST00000354547 SPCS1Q9Y6A9 102 aa14.74□□□□□ -0.05
COL13A1-201ENST00000354547 RNASE3P12724 160 aaKnown RBP14.73□□□□□ -0.05
COL13A1-201ENST00000354547 TRAV12-3A0A0B4J271 114 aa14.73□□□□□ -0.05
COL13A1-201ENST00000354547 ANKRD17O75179 2603 aaKnown RBP14.73□□□□□ -0.05
COL13A1-201ENST00000354547 A0A087WWL8 130 aa14.72□□□□□ -0.05
COL13A1-201ENST00000354547 A0A1W2PPM0 123 aa14.72□□□□□ -0.05
COL13A1-201ENST00000354547 ATP6V0BQ99437 205 aa14.72□□□□□ -0.05
COL13A1-201ENST00000354547 LRRK2Q5S007 2527 aa14.72□□□□□ -0.05
COL13A1-201ENST00000354547 K7EP34 96 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 SAMD5Q5TGI4 173 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 CSTL1Q9H114 145 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 CHTOPQ9Y3Y2 248 aaKnown RBP14.71□□□□□ -0.05
COL13A1-201ENST00000354547 F5H697 171 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 IGHV4-59P01825 116 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 ZNF688P0C7X2 276 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 EMP1P54849 157 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 UFSP1Q6NVU6 142 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 C2orf66Q6UXQ4 117 aa14.71□□□□□ -0.05
COL13A1-201ENST00000354547 PRSS47A8MTI9 375 aa14.71□□□□□ -0.06
COL13A1-201ENST00000354547 TRAV12-2A0A075B6T6 113 aa14.7□□□□□ -0.06
COL13A1-201ENST00000354547 ORMDL2Q53FV1 153 aa14.7□□□□□ -0.06
COL13A1-201ENST00000354547 FAM159AQ6UWV7 190 aa14.7□□□□□ -0.06
COL13A1-201ENST00000354547 H7C1H1 209 aa14.7□□□□□ -0.06
COL13A1-201ENST00000354547 CD7P09564 240 aa14.7□□□□□ -0.06
COL13A1-201ENST00000354547 FAM74A4Q5TZK3 123 aa14.7□□□□□ -0.06
COL13A1-201ENST00000354547 FABP2P12104 132 aa14.69□□□□□ -0.06
COL13A1-201ENST00000354547 DUX5Q96PT3 197 aa14.69□□□□□ -0.06
COL13A1-201ENST00000354547 HIST1H4GQ99525 98 aa14.69□□□□□ -0.06
COL13A1-201ENST00000354547 F8VRH5 84 aa14.69□□□□□ -0.06
COL13A1-201ENST00000354547 IGLV1-40P01703 118 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 PLNP26678 52 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 PSMG4Q5JS54 123 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 CEND1Q8N111 149 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 HIGD1BQ9P298 99 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 ABCA12Q86UK0 2595 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 MXRA5Q9NR99 2828 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 TOMM6Q96B49 74 aa14.68□□□□□ -0.06
COL13A1-201ENST00000354547 MYO9AB2RTY4 2548 aa14.67□□□□□ -0.06
COL13A1-201ENST00000354547 DEFB112Q30KQ8 113 aa14.67□□□□□ -0.06
COL13A1-201ENST00000354547 FAM19A4Q96LR4 140 aa14.67□□□□□ -0.06
COL13A1-201ENST00000354547 TLN2Q9Y4G6 2542 aa14.67□□□□□ -0.06
COL13A1-201ENST00000354547 H3BUA1 57 aa14.67□□□□□ -0.06
COL13A1-201ENST00000354547 PTPN13Q12923 2485 aa14.67□□□□□ -0.06
COL13A1-201ENST00000354547 CUBNO60494 3623 aa14.67□□□□□ -0.06
COL13A1-201ENST00000354547 RNF223E7ERA6 249 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 K7ERU9 68 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 NDUFS8O00217 210 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 DUSP14O95147 198 aaKnown RBP14.66□□□□□ -0.06
COL13A1-201ENST00000354547 C20orf78Q9BR46 151 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 OR11H12B2RN74 326 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 OR11H1Q8NG94 326 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 OR11H2Q8NH07 326 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 BAALCQ8WXS3 180 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 PRSS29PA6NIE9 313 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 B4DSR2 109 aa14.66□□□□□ -0.06
COL13A1-201ENST00000354547 HLA-DRB4P13762 266 aa14.65□□□□□ -0.06
COL13A1-201ENST00000354547 ID1P41134 155 aa14.65□□□□□ -0.06
COL13A1-201ENST00000354547 NEXN-AS1Q8NBZ9 246 aa14.65□□□□□ -0.06
COL13A1-201ENST00000354547 HLA-DRB4X5D2U9 266 aa14.65□□□□□ -0.06
COL13A1-201ENST00000354547 DCANP1Q8TF63 244 aa14.65□□□□□ -0.06
COL13A1-201ENST00000354547 CYSLTR1Q9Y271 337 aa14.65□□□□□ -0.06
COL13A1-201ENST00000354547 RPL39P62891 51 aaKnown RBP14.64□□□□□ -0.07
COL13A1-201ENST00000354547 SCGB2A2Q13296 93 aa14.64□□□□□ -0.07
COL13A1-201ENST00000354547 RIPPLY3P57055 190 aa14.64□□□□□ -0.07
COL13A1-201ENST00000354547 CD300EQ496F6 205 aaPredicted RBP14.63□□□□□ -0.07
COL13A1-201ENST00000354547 ZNF462Q96JM2 2506 aa14.63□□□□□ -0.07
COL13A1-201ENST00000354547 SYNJ2BPP57105 145 aa14.63□□□□□ -0.07
COL13A1-201ENST00000354547 MDFICQ9P1T7 246 aa14.63□□□□□ -0.07
COL13A1-201ENST00000354547 TP53TG1Q9Y2A0 90 aa14.63□□□□□ -0.07
COL13A1-201ENST00000354547 TRAV12-1A0A0B4J245 112 aa14.62□□□□□ -0.07
COL13A1-201ENST00000354547 HTN1P15515 57 aa14.62□□□□□ -0.07
COL13A1-201ENST00000354547 SUMO4Q6EEV6 95 aa14.62□□□□□ -0.07
COL13A1-201ENST00000354547 ZNF256Q9Y2P7 627 aaPredicted RBP14.62□□□□□ -0.07
COL13A1-201ENST00000354547 KLLNB2CW77 178 aa14.62□□□□□ -0.07
COL13A1-201ENST00000354547 RPL24P83731 157 aaKnown RBP14.62□□□□□ -0.07
COL13A1-201ENST00000354547 CFHR3Q02985 330 aa14.62□□□□□ -0.07
COL13A1-201ENST00000354547 TM2D2Q9BX73 214 aa14.62□□□□□ -0.07
COL13A1-201ENST00000354547 TGFAP01135 160 aa14.61□□□□□ -0.07
COL13A1-201ENST00000354547 SPINK13Q1W4C9 94 aa14.61□□□□□ -0.07
COL13A1-201ENST00000354547 KLHL30-AS1Q8NEE0 82 aa14.61□□□□□ -0.07
COL13A1-201ENST00000354547 PRADC1Q9BSG0 188 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms