RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 RBAKDNA6NC62 111 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 EFNA2O43921 213 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 DAND5Q8N907 189 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 KIR2DL5BA0A0G2JN68 375 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 KIR2DL5BA0A0G2JPC4 375 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 KIR2DL5AQ8N109 375 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 TEX49A0A1B0GTD5 131 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 C4orf51C9J302 202 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 TIMM17BO60830 172 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 IGHV4-30-4P0DP06 118 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 IGHV4-31P0DP07 118 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 DSCR9P59020 149 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 LINC00205P59089 165 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 RLFQ13129 1914 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 TMEM131Q92545 1883 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 IGHV2-70DA0A0C4DH43 119 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 A4D1N5 150 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 Q8NFD4 153 aa6.42□□□□□ -1.38
SCN8A-201ENST00000354534 COLQQ9Y215 455 aaPredicted RBP6.42□□□□□ -1.38
SCN8A-201ENST00000354534 AGRNO00468 2067 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 LINC01545Q5VT33 79 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 TEX36Q5VZQ5 186 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 IGKV1D-8A0A087WSZ0 117 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 IGHV1-18A0A0C4DH31 117 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 COX7A2LO14548 114 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 IGLC1P0CG04 106 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 TMEM178BH3BS89 294 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 ZNF883P0CG24 379 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 LINC00114Q6XXX2 140 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 C9orf106Q8NAJ2 232 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 SHANK2-AS3Q9BTD1 123 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 LINC01619G3V211 115 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 LECT2O14960 151 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 TANC1Q9C0D5 1861 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 IGHV4-61A0A0C4DH41 118 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 NRXN2Q9P2S2 1712 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 ZNF491Q8N8L2 437 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 IGHV1-46P01743 117 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 TMEM14EPQ6UXP3 125 aa6.41□□□□□ -1.38
SCN8A-201ENST00000354534 C15orf62A8K5M9 175 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 ADCYAP1P18509 176 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 MST1LQ2TV78 715 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 ZNF672Q499Z4 452 aaPredicted RBP6.4□□□□□ -1.38
SCN8A-201ENST00000354534 NPBQ8NG41 125 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 DIRC1Q969H9 104 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 ZC2HC1AQ96GY0 325 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 SNURFQ9Y675 71 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 E9PQ18 207 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 IGHV4-38-2P0DP08 117 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 PRR20EP86478 221 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 PRR20CP86479 221 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 PRR20DP86480 221 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 PRR20BP86481 221 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 PRR20AP86496 221 aa6.4□□□□□ -1.38
SCN8A-201ENST00000354534 RNASE8Q8TDE3 154 aaKnown RBP6.4□□□□□ -1.38
SCN8A-201ENST00000354534 MRPL53Q96EL3 112 aaKnown RBP6.4□□□□□ -1.38
SCN8A-201ENST00000354534 SERTAD4-AS1Q5TG53 156 aa6.4□□□□□ -1.39
SCN8A-201ENST00000354534 SCXQ7RTU7 201 aa6.4□□□□□ -1.39
SCN8A-201ENST00000354534 IGLV3-32A0A0A0MS00 114 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 SIPA1L1O43166 1804 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 PIK3CD-AS1Q5SR53 167 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 IGKV1-27A0A075B6S5 117 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 FOXF2Q12947 444 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 SAA4P35542 130 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 V9GYV3 84 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 IGLC6P0CF74 106 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 IGKV1-9A0A0C4DH69 117 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 LINC00473A8K010 186 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 PLXNA2O75051 1894 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 MST1P26927 711 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 PYGO2Q9BRQ0 406 aa6.39□□□□□ -1.39
SCN8A-201ENST00000354534 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
SCN8A-201ENST00000354534 PAQR4Q8N4S7 273 aaPredicted RBP6.38□□□□□ -1.39
SCN8A-201ENST00000354534 ARTNQ5T4W7 220 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 LINC00643Q86TS7 51 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 EIF4EBP2Q13542 120 aaPredicted RBP6.38□□□□□ -1.39
SCN8A-201ENST00000354534 IGHV3-30P01768 117 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 IGHV3-30-3P0DP02 117 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 IGHV3-30-5P0DP03 117 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 GPHB5Q86YW7 130 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 PRR25Q96S07 402 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 B9D2Q9BPU9 175 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 LY6HO94772 140 aa6.38□□□□□ -1.39
SCN8A-201ENST00000354534 NDUFB8O95169 186 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 IGKV1D-12P01611 117 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 ENHOQ6UWT2 76 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 COL11A2P13942 1736 aaPredicted RBP6.37□□□□□ -1.39
SCN8A-201ENST00000354534 A0A087WV48 116 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 GNRH2O43555 120 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 B4DSR2 109 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 IGKV1-16P04430 117 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 ZFAND3Q9H8U3 227 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 TICRRQ7Z2Z1 1910 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 TRBV6-6A0A0A6YYG2 114 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 PLXNA3P51805 1871 aa6.37□□□□□ -1.39
SCN8A-201ENST00000354534 SRRM5B3KS81 715 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms