RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SPANXDQ9BXN6 97 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 ARL2-SNX15V9GYD0 113 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 MUC4Q99102 2169 aa8.17□□□□□ -1.1
RTN3-204ENST00000354497 IGKV3-7A0A075B6H7 116 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 TRAV10A0A0B4J240 114 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 HLA-DMBP28068 263 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 PAX9P55771 341 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 NMSQ5H8A3 153 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 EBLN2Q6P2I7 272 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 C2orf91Q6ZV80 131 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 CHCHD1Q96BP2 118 aaKnown RBP8.16□□□□□ -1.1
RTN3-204ENST00000354497 ARHGAP5-AS1Q96IT6 56 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 ANAPC13Q9BS18 74 aa8.16□□□□□ -1.1
RTN3-204ENST00000354497 IGHV3OR16-8A0A075B7F1 116 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 GATA2P23769 480 aaPredicted RBP8.15□□□□□ -1.1
RTN3-204ENST00000354497 SPATA31B1PQ5VZV4 182 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 PVRIGQ6DKI7 326 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 Q6ZTC4 211 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 TMEM190Q8WZ59 177 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 C11orf52Q96A22 123 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 OSTCQ9NRP0 149 aa8.15□□□□□ -1.1
RTN3-204ENST00000354497 HERC1Q15751 4861 aa8.15□□□□□ -1.11
RTN3-204ENST00000354497 E7EUB6 86 aa8.14□□□□□ -1.11
RTN3-204ENST00000354497 H3BUT2 72 aa8.14□□□□□ -1.11
RTN3-204ENST00000354497 ISLRO14498 428 aa8.14□□□□□ -1.11
RTN3-204ENST00000354497 HMGB3O15347 200 aaKnown RBP8.14□□□□□ -1.11
RTN3-204ENST00000354497 HSBP1O75506 76 aa8.14□□□□□ -1.11
RTN3-204ENST00000354497 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
RTN3-204ENST00000354497 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
RTN3-204ENST00000354497 DAZ1Q9NQZ3 744 aaKnown RBP8.14□□□□□ -1.11
RTN3-204ENST00000354497 IGLV11-55A0A075B6I3 123 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 IGLV2-18A0A075B6J9 118 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 F2Z2F3 143 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 F8WDY8 70 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 SNAI2O43623 268 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 P0DMU3 169 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 FAM231AP0DMU4 169 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 FAM231CP0DMU5 169 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 EVI2AP22794 236 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 NPPCP23582 126 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 ID1P41134 155 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 UBE2DNLQ8IWF7 75 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 GTSF1Q8WW33 167 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 DNAJC30Q96LL9 226 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 OR2W1Q9Y3N9 320 aa8.13□□□□□ -1.11
RTN3-204ENST00000354497 IGHV4-28A0A0C4DH34 117 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 FAM90A26D6RGX4 464 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 CMC4P56277 68 aaPredicted RBP8.12□□□□□ -1.11
RTN3-204ENST00000354497 KIR3DS1Q14943 382 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 Q56UQ5 140 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 TEPPQ6URK8 271 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 Q8NAQ8 132 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 IGHV3-49A0A0A0MS15 119 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 IGHV3-21A0A0B4J1V1 117 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 C3orf85A0A1B0GTC6 90 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 B5MCH6 92 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 M0R2Z0 102 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 Q6ZUT4 128 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 H2BFWTQ7Z2G1 175 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 TMEM167AQ8TBQ9 72 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 MRPL32Q9BYC8 188 aaKnown RBP8.12□□□□□ -1.11
RTN3-204ENST00000354497 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
RTN3-204ENST00000354497 CSDC2Q9Y534 153 aaKnown RBP8.12□□□□□ -1.11
RTN3-204ENST00000354497 DEFB131BA0A096LNP1 70 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 H3BMG7 143 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 RHODO00212 210 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 SSSCA1O60232 199 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 CST7O76096 145 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 APCSP02743 223 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 RBMY1A1P0DJD3 496 aaKnown RBP8.11□□□□□ -1.11
RTN3-204ENST00000354497 RBMY1CP0DJD4 496 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 RPL30P62888 115 aaKnown RBP8.11□□□□□ -1.11
RTN3-204ENST00000354497 FOXI1Q12951 378 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
RTN3-204ENST00000354497 LGALS9BQ3B8N2 356 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 LINC01545Q5VT33 79 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 OR10G7Q8NGN6 311 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 TM2D2Q9BX73 214 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 V9GYV3 84 aa8.11□□□□□ -1.11
RTN3-204ENST00000354497 SMIM27A0A1W2PRY6 76 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 E9PLD3 99 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 NDUFA4O00483 81 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 FGF6P10767 208 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 SRIP30626 198 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 RPS28P62857 69 aaKnown RBP8.1□□□□□ -1.11
RTN3-204ENST00000354497 RPL8P62917 257 aaKnown RBP8.1□□□□□ -1.11
RTN3-204ENST00000354497 KIAA1644Q3SXP7 199 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 Q6AWC8 147 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 VSIRQ9H7M9 311 aa8.1□□□□□ -1.11
RTN3-204ENST00000354497 IGHV3OR16-13A0A075B7E8 117 aa8.09□□□□□ -1.11
RTN3-204ENST00000354497 IGHV3-74A0A0B4J1X5 117 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms