RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
PDAP1-201ENST00000350498 LAGE3Q14657 143 aa12.53□□□□□ -0.4
PDAP1-201ENST00000350498 ZFAND2AQ8N6M9 145 aa12.53□□□□□ -0.4
PDAP1-201ENST00000350498 SMIM13P0DJ93 91 aa12.52□□□□□ -0.4
PDAP1-201ENST00000350498 RHPN1-AS1Q9BWJ2 59 aa12.52□□□□□ -0.4
PDAP1-201ENST00000350498 GNRH2O43555 120 aa12.52□□□□□ -0.41
PDAP1-201ENST00000350498 NPFFR1Q9GZQ6 430 aa12.52□□□□□ -0.41
PDAP1-201ENST00000350498 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.41
PDAP1-201ENST00000350498 NDUFA4O00483 81 aa12.51□□□□□ -0.41
PDAP1-201ENST00000350498 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
PDAP1-201ENST00000350498 DEFB112Q30KQ8 113 aa12.51□□□□□ -0.41
PDAP1-201ENST00000350498 HIST2H2BDQ6DRA6 164 aa12.51□□□□□ -0.41
PDAP1-201ENST00000350498 MUC4Q99102 2169 aa12.51□□□□□ -0.41
PDAP1-201ENST00000350498 MTURNQ8N3F0 131 aa12.51□□□□□ -0.41
PDAP1-201ENST00000350498 C14orf178Q8N769 122 aaPredicted RBP12.51□□□□□ -0.41
PDAP1-201ENST00000350498 MYOZ3Q8TDC0 251 aa12.51□□□□□ -0.41
PDAP1-201ENST00000350498 CSTL1Q9H114 145 aa12.51□□□□□ -0.41
PDAP1-201ENST00000350498 NEGR1Q7Z3B1 354 aa12.5□□□□□ -0.41
PDAP1-201ENST00000350498 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
PDAP1-201ENST00000350498 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
PDAP1-201ENST00000350498 FABP2P12104 132 aa12.5□□□□□ -0.41
PDAP1-201ENST00000350498 NAV2Q8IVL1 2488 aa12.49□□□□□ -0.41
PDAP1-201ENST00000350498 ANXA2RQ3ZCQ2 193 aa12.49□□□□□ -0.41
PDAP1-201ENST00000350498 C9orf139Q6ZV77 190 aa12.49□□□□□ -0.41
PDAP1-201ENST00000350498 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
PDAP1-201ENST00000350498 NDUFS8O00217 210 aa12.49□□□□□ -0.41
PDAP1-201ENST00000350498 IGLV1-40P01703 118 aa12.49□□□□□ -0.41
PDAP1-201ENST00000350498 CEND1Q8N111 149 aa12.49□□□□□ -0.41
PDAP1-201ENST00000350498 G3V4G9 280 aa12.48□□□□□ -0.41
PDAP1-201ENST00000350498 ATP5LO75964 103 aa12.48□□□□□ -0.41
PDAP1-201ENST00000350498 MRPL53Q96EL3 112 aaKnown RBP12.48□□□□□ -0.41
PDAP1-201ENST00000350498 MYO9AB2RTY4 2548 aa12.48□□□□□ -0.41
PDAP1-201ENST00000350498 NF1P21359 2839 aa12.48□□□□□ -0.41
PDAP1-201ENST00000350498 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
PDAP1-201ENST00000350498 RASL10AQ92737 203 aa12.48□□□□□ -0.41
PDAP1-201ENST00000350498 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
PDAP1-201ENST00000350498 SONP18583 2426 aaKnown RBP12.48□□□□□ -0.41
PDAP1-201ENST00000350498 UBR5O95071 2799 aaPredicted RBP12.47□□□□□ -0.41
PDAP1-201ENST00000350498 A0A087WX48 190 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 B4DSR2 109 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
PDAP1-201ENST00000350498 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 MGPP08493 103 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 CFHR3Q02985 330 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.411e-7■■□□□ 12.5
PDAP1-201ENST00000350498 AMTNQ6UX39 209 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 HIGD1BQ9P298 99 aa12.47□□□□□ -0.41
PDAP1-201ENST00000350498 USMG5Q96IX5 58 aa12.46□□□□□ -0.41
PDAP1-201ENST00000350498 TEX48A0A1B0GUV7 120 aa12.46□□□□□ -0.42
PDAP1-201ENST00000350498 TGFAP01135 160 aa12.46□□□□□ -0.42
PDAP1-201ENST00000350498 S100A4P26447 101 aaKnown RBP12.46□□□□□ -0.42
PDAP1-201ENST00000350498 JPT2Q9H910 190 aa12.46□□□□□ -0.42
PDAP1-201ENST00000350498 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.45□□□□□ -0.42
PDAP1-201ENST00000350498 EMP1P54849 157 aa12.45□□□□□ -0.42
PDAP1-201ENST00000350498 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
PDAP1-201ENST00000350498 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
PDAP1-201ENST00000350498 TM2D2Q9BX73 214 aa12.44□□□□□ -0.42
PDAP1-201ENST00000350498 IGHV4-4A0A075B6R2 117 aa12.44□□□□□ -0.42
PDAP1-201ENST00000350498 SUMO2P61956 95 aaKnown RBP12.44□□□□□ -0.42
PDAP1-201ENST00000350498 SCGB3A1Q96QR1 104 aa12.44□□□□□ -0.42
PDAP1-201ENST00000350498 HIST1H4GQ99525 98 aa12.44□□□□□ -0.42
PDAP1-201ENST00000350498 DAZ1Q9NQZ3 744 aaKnown RBP12.44□□□□□ -0.42
PDAP1-201ENST00000350498 SMPXQ9UHP9 88 aa12.44□□□□□ -0.42
PDAP1-201ENST00000350498 APCP25054 2843 aa12.43□□□□□ -0.42
PDAP1-201ENST00000350498 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
PDAP1-201ENST00000350498 WFDC2Q14508 124 aa12.43□□□□□ -0.42
PDAP1-201ENST00000350498 PHLDA3Q9Y5J5 127 aa12.43□□□□□ -0.42
PDAP1-201ENST00000350498 A0A096LNT2 108 aa12.43□□□□□ -0.42
PDAP1-201ENST00000350498 IGLL5B9A064 214 aa12.43□□□□□ -0.42
PDAP1-201ENST00000350498 H3BMG7 143 aa12.43□□□□□ -0.42
PDAP1-201ENST00000350498 OR5A1Q8NGJ0 315 aa12.43□□□□□ -0.42
PDAP1-201ENST00000350498 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 PSMB8P28062 276 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 C12orf74Q32Q52 190 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 CYSLTR1Q9Y271 337 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
PDAP1-201ENST00000350498 AKAP9Q99996 3911 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 TRAV12-2A0A075B6T6 113 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 TRAV21A0A0B4J279 112 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 F8VRH5 84 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 OVOL1O14753 267 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 ZNF688P0C7X2 276 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 SFTA2Q6UW10 78 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 ATP6V0BQ99437 205 aa12.42□□□□□ -0.42
PDAP1-201ENST00000350498 DCANP1Q8TF63 244 aa12.41□□□□□ -0.42
PDAP1-201ENST00000350498 SETD2Q9BYW2 2564 aaPredicted RBP12.41□□□□□ -0.42
PDAP1-201ENST00000350498 NIPBLQ6KC79 2804 aaeCLIP12.41□□□□□ -0.426e-6■□□□□ 9
PDAP1-201ENST00000350498 C2orf66Q6UXQ4 117 aa12.41□□□□□ -0.42
PDAP1-201ENST00000350498 SH2D6Q7Z4S9 175 aa12.41□□□□□ -0.42
PDAP1-201ENST00000350498 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 H3BUA1 57 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 H7C1H1 209 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 C18orf65Q6ZTR6 163 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 BAALCQ8WXS3 180 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 ZNF479Q96JC4 524 aa12.4□□□□□ -0.42
PDAP1-201ENST00000350498 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms