RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 A4D1N5 150 aa10.82□□□□□ -0.68
RLIM-202ENST00000349225 M0QXV9 152 aa10.82□□□□□ -0.68
RLIM-202ENST00000349225 PCNX1Q96RV3 2341 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 H7C2G1 150 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 NBR2O15453 112 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 Q6Q795 121 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 TMEM263Q8WUH6 116 aaKnown RBP10.81□□□□□ -0.68
RLIM-202ENST00000349225 C15orf53Q8NAA6 179 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 RBAKDNA6NC62 111 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 IGFL2Q6UWQ7 119 aa10.81□□□□□ -0.68
RLIM-202ENST00000349225 M0R381 172 aa10.8□□□□□ -0.68
RLIM-202ENST00000349225 BUB3O43684 328 aa10.8□□□□□ -0.68
RLIM-202ENST00000349225 ASCL5Q7RTU5 278 aa10.8□□□□□ -0.68
RLIM-202ENST00000349225 LYNX1G3V0Z9 82 aa10.8□□□□□ -0.68
RLIM-202ENST00000349225 LYNX1P0DP58 116 aa10.8□□□□□ -0.68
RLIM-202ENST00000349225 BSPH1Q075Z2 132 aa10.8□□□□□ -0.68
RLIM-202ENST00000349225 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
RLIM-202ENST00000349225 CLPSL1A2RUU4 121 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 RPL39P62891 51 aaKnown RBP10.79□□□□□ -0.68
RLIM-202ENST00000349225 IGIPA6NJ69 53 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 RNF5Q99942 180 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 ZFAND3Q9H8U3 227 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 MDFICQ9P1T7 246 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 MUC4Q99102 2169 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 CUL9Q8IWT3 2517 aa10.79□□□□□ -0.68
RLIM-202ENST00000349225 IGHV3-49A0A0A0MS15 119 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 TRAV17A0A0B4J275 112 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 MEIG1Q5JSS6 88 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 PPDPFQ9H3Y8 114 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 CACNA1BQ00975 2339 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 J3KRW8 73 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 NPBQ8NG41 125 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 TCF15Q12870 199 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 CHCHD5Q9BSY4 110 aa10.78□□□□□ -0.68
RLIM-202ENST00000349225 LINC01620Q4KN68 170 aa10.77□□□□□ -0.68
RLIM-202ENST00000349225 FAM57AQ8TBR7 257 aa10.77□□□□□ -0.68
RLIM-202ENST00000349225 TIMD4Q96H15 378 aa10.77□□□□□ -0.68
RLIM-202ENST00000349225 ARRDC1-AS1Q9H2J1 176 aa10.77□□□□□ -0.68
RLIM-202ENST00000349225 IGHV4-39P01824 125 aa10.77□□□□□ -0.69
RLIM-202ENST00000349225 RNASE6Q93091 150 aaKnown RBP10.77□□□□□ -0.69
RLIM-202ENST00000349225 RPL13AP40429 203 aaKnown RBP10.77□□□□□ -0.69
RLIM-202ENST00000349225 TP53TG1Q9Y2A0 90 aa10.77□□□□□ -0.69
RLIM-202ENST00000349225 VPREB3Q9UKI3 123 aa10.76□□□□□ -0.69
RLIM-202ENST00000349225 TRAV8-4A0A0B4J246 113 aa10.76□□□□□ -0.69
RLIM-202ENST00000349225 P0DMU3 169 aa10.76□□□□□ -0.69
RLIM-202ENST00000349225 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
RLIM-202ENST00000349225 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
RLIM-202ENST00000349225 PRR30Q53SZ7 412 aaPredicted RBP10.76□□□□□ -0.69
RLIM-202ENST00000349225 ABCA4P78363 2273 aa10.76□□□□□ -0.69
RLIM-202ENST00000349225 MGPP08493 103 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 LINC01600Q96MT4 127 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 LINC01587Q99440 93 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 LGALS9O00182 355 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 DEFB1P60022 68 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 MUSTN1Q8IVN3 82 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 ZNF580Q9UK33 172 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 MAP1BP46821 2468 aaKnown RBP10.75□□□□□ -0.69
RLIM-202ENST00000349225 J3QQQ9 107 aa10.75□□□□□ -0.69
RLIM-202ENST00000349225 C9orf47Q6ZRZ4 202 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 BEX4Q9NWD9 120 aaPredicted RBP10.74□□□□□ -0.69
RLIM-202ENST00000349225 PIEZO2Q9H5I5 2752 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 ZNF883P0CG24 379 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 ID1P41134 155 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 HES1Q14469 280 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 TRIAP1O43715 76 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 ARL3P36405 182 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 FOXC1Q12948 553 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 PMVKQ15126 192 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 OR10J6PQ8NGY7 276 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 C20orf173Q96LM9 149 aa10.74□□□□□ -0.69
RLIM-202ENST00000349225 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
RLIM-202ENST00000349225 CDX4O14627 284 aaPredicted RBP10.73□□□□□ -0.69
RLIM-202ENST00000349225 OPRPNQ99935 248 aaPredicted RBP10.73□□□□□ -0.69
RLIM-202ENST00000349225 A0A0B4J2C4 111 aa10.72□□□□□ -0.69
RLIM-202ENST00000349225 LINC00315P59091 139 aa10.72□□□□□ -0.69
RLIM-202ENST00000349225 HERVK_113P61574 105 aa10.72□□□□□ -0.69
RLIM-202ENST00000349225 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
RLIM-202ENST00000349225 TRBV10-2A0A0K0K1G8 114 aa10.72□□□□□ -0.69
RLIM-202ENST00000349225 H7C423 109 aa10.72□□□□□ -0.69
RLIM-202ENST00000349225 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
RLIM-202ENST00000349225 H3BMM0 161 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 SCGB2A1O75556 95 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 CLEC3BP05452 202 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 ATXN8Q156A1 80 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 Q6ZSV7 163 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 UBE2WQ96B02 151 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 GNRH2O43555 120 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 DUX3Q96PT4 197 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 JPT2Q9H910 190 aa10.71□□□□□ -0.69
RLIM-202ENST00000349225 TRIOBPQ9H2D6 2365 aa10.71□□□□□ -0.7
RLIM-202ENST00000349225 C15orf32Q32M92 178 aa10.71□□□□□ -0.7
RLIM-202ENST00000349225 E7EQL1 145 aa10.7□□□□□ -0.7
RLIM-202ENST00000349225 RNASE3P12724 160 aaKnown RBP10.7□□□□□ -0.7
RLIM-202ENST00000349225 DEFB123Q8N688 67 aa10.7□□□□□ -0.7
RLIM-202ENST00000349225 KIF25-AS1Q9Y6Z4 181 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms