RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 TIMD4Q96H15 378 aa13.54□□□□□ -0.24
VHL-202ENST00000345392 EMP1P54849 157 aa13.53□□□□□ -0.24
VHL-202ENST00000345392 UCNP55089 124 aa13.53□□□□□ -0.24
VHL-202ENST00000345392 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
VHL-202ENST00000345392 C9orf47Q6ZRZ4 202 aa13.53□□□□□ -0.24
VHL-202ENST00000345392 FAM110DQ8TAY7 271 aaPredicted RBP13.53□□□□□ -0.24
VHL-202ENST00000345392 MGPP08493 103 aa13.53□□□□□ -0.24
VHL-202ENST00000345392 C16orf92Q96LL3 132 aa13.53□□□□□ -0.24
VHL-202ENST00000345392 EBI3Q14213 229 aa13.52□□□□□ -0.24
VHL-202ENST00000345392 GLMPQ8WWB7 406 aa13.52□□□□□ -0.24
VHL-202ENST00000345392 METTL26Q96S19 204 aa13.52□□□□□ -0.24
VHL-202ENST00000345392 LINC01619G3V211 115 aa13.52□□□□□ -0.25
VHL-202ENST00000345392 DLX4Q92988 240 aaPredicted RBP13.52□□□□□ -0.25
VHL-202ENST00000345392 C20orf173Q96LM9 149 aa13.52□□□□□ -0.25
VHL-202ENST00000345392 C1QTNF4Q9BXJ3 329 aa13.52□□□□□ -0.25
VHL-202ENST00000345392 S100A4P26447 101 aaKnown RBP13.51□□□□□ -0.25
VHL-202ENST00000345392 ADORA2A-AS1P86434 159 aa13.51□□□□□ -0.25
VHL-202ENST00000345392 TSPAN13O95857 204 aa13.51□□□□□ -0.25
VHL-202ENST00000345392 CDIP1Q9H305 208 aa13.51□□□□□ -0.25
VHL-202ENST00000345392 FHL3Q13643 280 aa13.5□□□□□ -0.25
VHL-202ENST00000345392 IGSF10Q6WRI0 2623 aa13.5□□□□□ -0.25
VHL-202ENST00000345392 A0A1W2PPR1 153 aa13.5□□□□□ -0.25
VHL-202ENST00000345392 RNF223E7ERA6 249 aa13.49□□□□□ -0.25
VHL-202ENST00000345392 TGFAP01135 160 aa13.49□□□□□ -0.25
VHL-202ENST00000345392 PHLDA3Q9Y5J5 127 aa13.49□□□□□ -0.25
VHL-202ENST00000345392 HIVEP3Q5T1R4 2406 aa13.49□□□□□ -0.25
VHL-202ENST00000345392 DUSP14O95147 198 aaKnown RBP13.48□□□□□ -0.25
VHL-202ENST00000345392 MT-ATP8P03928 68 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 DPH3P1Q9H4G8 78 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 TMEM238LA0A1B0GVL6 79 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 A6NJY4 79 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 COX6B1P14854 86 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 UBE2D1P51668 147 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 PRORYQ9H606 182 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 LINC00527Q9UJ94 153 aa13.48□□□□□ -0.25
VHL-202ENST00000345392 GNRH2O43555 120 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 CRYGDP07320 174 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 SPINK8P0C7L1 97 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 EEF1AKMT3Q96AZ1 226 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 MRPL53Q96EL3 112 aaKnown RBP13.47□□□□□ -0.25
VHL-202ENST00000345392 ANXA2RQ3ZCQ2 193 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 MINOS1Q5TGZ0 78 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 ZFAND2AQ8N6M9 145 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 MINOS1-NBL1R4GNA1 71 aa13.47□□□□□ -0.25
VHL-202ENST00000345392 C11orf86A6NJI1 115 aa13.46□□□□□ -0.25
VHL-202ENST00000345392 CD7P09564 240 aa13.46□□□□□ -0.25
VHL-202ENST00000345392 GEMIN7Q9H840 131 aaKnown RBP13.46□□□□□ -0.25
VHL-202ENST00000345392 OOSP1A8MZH6 123 aa13.46□□□□□ -0.26
VHL-202ENST00000345392 C11orf71Q6IPW1 123 aa13.46□□□□□ -0.26
VHL-202ENST00000345392 ASIPP42127 132 aa13.45□□□□□ -0.26
VHL-202ENST00000345392 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
VHL-202ENST00000345392 F6UB75 175 aa13.45□□□□□ -0.26
VHL-202ENST00000345392 RNASE4P34096 147 aaKnown RBP13.45□□□□□ -0.26
VHL-202ENST00000345392 XGP55808 180 aa13.45□□□□□ -0.26
VHL-202ENST00000345392 Q6ZS46 218 aa13.45□□□□□ -0.26
VHL-202ENST00000345392 U3KQE9 123 aa13.45□□□□□ -0.26
VHL-202ENST00000345392 IGKV3-7A0A075B6H7 116 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 TCL1BO95988 128 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 TSHBP01222 138 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 UBE2D3P61077 147 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 UBE2D2P62837 147 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 FBXL19-AS1Q494R0 122 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 IGHV3OR16-10A0A075B7F0 116 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 ARL3P36405 182 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 NDUFA11Q86Y39 141 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 GPHB5Q86YW7 130 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 ATP6V0E2Q8NHE4 81 aa13.44□□□□□ -0.26
VHL-202ENST00000345392 TRAV21A0A0B4J279 112 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 ITLN2Q8WWU7 325 aaPredicted RBP13.43□□□□□ -0.26
VHL-202ENST00000345392 AJUBAQ96IF1 538 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 CFAP46Q8IYW2 2715 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 IGLV4-69A0A075B6H9 119 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 TRBV7-1A0A0A6YYK4 115 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 A0A0J9YY99 117 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 CRYBA4P53673 196 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 RPL39P62891 51 aaKnown RBP13.43□□□□□ -0.26
VHL-202ENST00000345392 C1orf122Q6ZSJ8 110 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 TP53TG1Q9Y2A0 90 aa13.43□□□□□ -0.26
VHL-202ENST00000345392 CENPVL3A0A0U1RRI6 287 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 UNQ9165/PRO28630Q6UXU0 137 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 Q6ZUT4 128 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 MUC4Q99102 2169 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 SAA4P35542 130 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 TSPEAR-AS2P59090 65 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 OR10J6PQ8NGY7 276 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 SIRPDQ9H106 197 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 JPT2Q9H910 190 aa13.42□□□□□ -0.26
VHL-202ENST00000345392 CFC1BP0CG36 223 aa13.41□□□□□ -0.26
VHL-202ENST00000345392 CFC1P0CG37 223 aa13.41□□□□□ -0.26
VHL-202ENST00000345392 RPL11P62913 178 aaKnown RBP13.41□□□□□ -0.26
VHL-202ENST00000345392 C9orf139Q6ZV77 190 aa13.41□□□□□ -0.26
VHL-202ENST00000345392 TMEM219Q86XT9 240 aa13.41□□□□□ -0.26
VHL-202ENST00000345392 LINC00477Q96M19 166 aa13.41□□□□□ -0.26
VHL-202ENST00000345392 TRBV12-3P01733 135 aa13.41□□□□□ -0.26
VHL-202ENST00000345392 RNASE3P12724 160 aaKnown RBP13.41□□□□□ -0.26
VHL-202ENST00000345392 TMEM170BQ5T4T1 132 aa13.4□□□□□ -0.26
VHL-202ENST00000345392 KIR2DL4Q99706 377 aa13.4□□□□□ -0.26
VHL-202ENST00000345392 UBTD1Q9HAC8 227 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms