RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PFN1P07737 140 aaKnown RBP8.44□□□□□ -1.06
SGCA-202ENST00000344627 S100A4P26447 101 aaKnown RBP8.44□□□□□ -1.06
SGCA-202ENST00000344627 FUSP35637 526 aaKnown RBP eCLIP8.44□□□□□ -1.06
SGCA-202ENST00000344627 FGF8P55075 233 aaPredicted RBP8.44□□□□□ -1.06
SGCA-202ENST00000344627 SAPCD1Q5SSQ6 148 aa8.44□□□□□ -1.06
SGCA-202ENST00000344627 KCNRGQ8N5I3 272 aa8.44□□□□□ -1.06
SGCA-202ENST00000344627 LINC00479Q96M42 142 aa8.44□□□□□ -1.06
SGCA-202ENST00000344627 PRADC1Q9BSG0 188 aa8.44□□□□□ -1.06
SGCA-202ENST00000344627 MSRB1Q9NZV6 116 aa8.44□□□□□ -1.06
SGCA-202ENST00000344627 CTXND1A0A1B0GTU2 59 aa8.43□□□□□ -1.06
SGCA-202ENST00000344627 A0A1W2PRE2 83 aa8.43□□□□□ -1.06
SGCA-202ENST00000344627 CRYGDP07320 174 aa8.43□□□□□ -1.06
SGCA-202ENST00000344627 GATA1P15976 413 aaPredicted RBP8.43□□□□□ -1.06
SGCA-202ENST00000344627 FRZBQ92765 325 aa8.43□□□□□ -1.06
SGCA-202ENST00000344627 PGPEP1LA6NFU8 196 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 RS1O15537 224 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 BCL2L11O43521 198 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 CIDEAO60543 219 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 IGLV2-11P01706 119 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 LGALSLQ3ZCW2 172 aaPredicted RBP8.42□□□□□ -1.06
SGCA-202ENST00000344627 OR10J3Q5JRS4 329 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 CFAP126Q5VTH2 177 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 EIF5AL1Q6IS14 154 aaKnown RBP8.42□□□□□ -1.06
SGCA-202ENST00000344627 SLC25A29Q8N8R3 303 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 OR11H4Q8NGC9 324 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 ARL2-SNX15V9GYD0 113 aa8.42□□□□□ -1.06
SGCA-202ENST00000344627 A0A087WTM6 91 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 TRAV8-6A0A0B4J262 113 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 FABP5P3A8MUU1 101 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 PEX7O00628 323 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 DNAH10OSP0CZ25 163 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 TIRAPP58753 221 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 RHOHQ15669 191 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 ZNF506Q5JVG8 444 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 DPPA3Q6W0C5 159 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 TMUB2Q71RG4 321 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 C9orf85Q96MD7 179 aa8.41□□□□□ -1.06
SGCA-202ENST00000344627 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.06
SGCA-202ENST00000344627 FAM74A7A6NL05 159 aa8.4□□□□□ -1.06
SGCA-202ENST00000344627 PSCAO43653 123 aa8.4□□□□□ -1.06
SGCA-202ENST00000344627 ASIPP42127 132 aa8.4□□□□□ -1.06
SGCA-202ENST00000344627 CST9LP1Q5W188 147 aa8.4□□□□□ -1.06
SGCA-202ENST00000344627 SLC51BQ86UW2 128 aa8.4□□□□□ -1.06
SGCA-202ENST00000344627 NTN5Q8WTR8 489 aaPredicted RBP8.4□□□□□ -1.06
SGCA-202ENST00000344627 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.06
SGCA-202ENST00000344627 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 MAP1LC3B2A6NCE7 125 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 B4DEV8 164 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 INAFM2P0DMQ5 153 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 RNASE3P12724 160 aaKnown RBP8.39□□□□□ -1.07
SGCA-202ENST00000344627 TPT1P13693 172 aaKnown RBP8.39□□□□□ -1.07
SGCA-202ENST00000344627 C9orf62Q8N4C0 152 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 STOML3Q8TAV4 291 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 HIST1H2BAQ96A08 127 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 ZNF471Q9BX82 626 aaPredicted RBP8.39□□□□□ -1.07
SGCA-202ENST00000344627 MAP1LC3BQ9GZQ8 125 aa8.39□□□□□ -1.07
SGCA-202ENST00000344627 IGKV3D-20A0A0C4DH25 116 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 M0R036 132 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
SGCA-202ENST00000344627 UBE2G1P62253 170 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 Q86TA4 180 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 ATP6V0E2Q8NHE4 81 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 PTH2Q96A98 100 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 Q9HAA7 133 aa8.38□□□□□ -1.07
SGCA-202ENST00000344627 GRIFINA4D1Z8 144 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 GAGE12JA6NER3 117 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 A8MWV9 139 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 H3BVH4 76 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 GCSHP23434 173 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 XGP55808 180 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 GAGE1Q13065 139 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 GAGE4Q13068 117 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 GAGE5Q13069 117 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 GAGE13Q4V321 117 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 SYT8Q8NBV8 401 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 TMEM70Q9BUB7 260 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 GTSF1LQ9H1H1 148 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 PARLQ9H300 379 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 CYTL1Q9NRR1 136 aa8.37□□□□□ -1.07
SGCA-202ENST00000344627 TMSB15BA0A087X1C1 80 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 A0A1B0GV50 99 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 SH2D1AO60880 128 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 FAM162BQ5T6X4 162 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 LELP1Q5T871 98 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 Q6ZSN1 163 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 ZC2HC1AQ96GY0 325 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 FMC1Q96HJ9 113 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 JPT2Q9H910 190 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 ZFP30Q9Y2G7 519 aa8.36□□□□□ -1.07
SGCA-202ENST00000344627 UMAD1C9J7I0 102 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 KRBOX1C9JBD0 128 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 ARMS2P0C7Q2 107 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 SEC11BP0C7V7 166 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms